Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_E16
(713 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 92 5e-19
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 74 1e-13
11_01_0750 - 6315126-6315896,6316371-6316784 66 3e-11
01_06_0824 - 32243495-32244319,32244449-32244859 53 2e-07
11_02_0012 - 7346282-7347136,7347234-7347593 52 3e-07
11_02_0011 - 7337618-7338496,7338596-7338991 50 2e-06
05_06_0044 - 25150322-25151260 50 2e-06
11_01_0767 + 6438648-6438809,6439146-6440000 46 4e-05
01_01_1152 + 9170628-9171899 43 2e-04
11_02_0014 - 7352619-7352918,7353173-7353418 40 0.002
04_04_0619 + 26652923-26653267,26653440-26654273 38 0.008
11_01_0771 + 6453130-6454488 33 0.17
07_01_0464 - 3504264-3504475,3504842-3505031,3505310-3505408,350... 28 8.5
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 91.9 bits (218), Expect = 5e-19
Identities = 67/216 (31%), Positives = 110/216 (50%), Gaps = 10/216 (4%)
Frame = -3
Query: 708 NAIYFKGAWSXKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPYK 529
NA+YFKGAW+ KFD T D +F++ K+++ P M K + N +++++PY+
Sbjct: 248 NALYFKGAWTEKFDASKTKDGEFHLLDGKSVQAPFM--STSKKQYILSYDNLKVLKLPYQ 305
Query: 528 --GD--QSSLIVVLPKDKDGITQLQEAL-KDPKTLETAQQSMYSTEVDLYLPKFKIETET 364
GD Q S+ ++LP+ +DG+ L E L +P+ LE + T LPKFKI
Sbjct: 306 QGGDKRQFSMYILLPEAQDGLWSLAEKLNSEPEFLEKHIPTRQVTVGQFKLPKFKISFGF 365
Query: 363 NLKDVLSNMNVNKIFNNDAQITRLL---KGESLSVSEAIQKXXXXXXXXXXXXXXXXXXX 193
D+L ++ ++ F+++A +T ++ +G++L VS K
Sbjct: 366 EASDLLKSLGLHLPFSSEADLTEMVDSPEGKNLFVSSVFHKSFVEVNEEGTEAAAATAAV 425
Query: 192 XESLSAVISEPTVFDANHPFVFFLTGE--GVNLFNG 91
SA I+E F A+HPF+F + + GV LF G
Sbjct: 426 ITLRSAPIAED--FVADHPFLFLIQEDMTGVVLFVG 459
Score = 70.1 bits (164), Expect = 2e-12
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 11/217 (5%)
Frame = -3
Query: 708 NAIYFKGAWSXKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPY- 532
NA+YFKGAW+ KFD T D +F++ ++++ P M R K S+ + +++++PY
Sbjct: 500 NALYFKGAWAEKFDVSKTEDGEFHLLDGESVQAPFMSTR--KKQYLSSYDSLKVLKLPYL 557
Query: 531 -KGD--QSSLIVVLPKDKDGITQLQEAL-KDPKTLETAQQSMYSTEVDLY-LPKFKIETE 367
GD Q S+ ++LP+ +DG+ L E L +P+ +E M V + LPKFKI
Sbjct: 558 QGGDKRQFSMYILLPEAQDGLWSLAEKLNSEPEFMEN-HIPMRPVHVGQFKLPKFKISFG 616
Query: 366 TNLKDVLSNMNVNKIFNNDAQITRLLK---GESLSVSEAIQKXXXXXXXXXXXXXXXXXX 196
+L + + +F ++ + ++ ++L VS K
Sbjct: 617 FGASGLLKGLGLPLLFGSEVDLIEMVDSPGAQNLFVSSVFHK---SFIEVNEEGTEATAA 673
Query: 195 XXESLSAVISEPTVFDANHPFVFFLTGE--GVNLFNG 91
S+ F A+HPF+F + + GV LF G
Sbjct: 674 VMVSMEHSRPRRLNFVADHPFMFLIREDVTGVILFIG 710
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 74.1 bits (174), Expect = 1e-13
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 10/216 (4%)
Frame = -3
Query: 708 NAIYFKGAWSXKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPY- 532
NA+YFKGAW+ KFD T D +F + K++ P M K S+ + +++++PY
Sbjct: 40 NALYFKGAWTEKFDASKTKDGEFRLLDGKSVLAPFM--STSKKQYLSSYDSLKVLKLPYQ 97
Query: 531 KG---DQSSLIVVLPKDKDGITQLQEAL-KDPKTLETAQQSMYSTEVDLYLPKFKIETET 364
KG Q S+ ++LP+ +DG+ L L +P+ LE + T LPKFKI
Sbjct: 98 KGRDLRQFSMYILLPEAQDGLWSLAAKLNSEPEFLEKRIPTRQVTVGKFKLPKFKISFGF 157
Query: 363 NLKDVLSNMNVNKIFNNDAQITRLL---KGESLSVSEAIQKXXXXXXXXXXXXXXXXXXX 193
D+L + + F++ A +T ++ + +L VS K
Sbjct: 158 EASDLLKILGLQLPFSSKADLTGMVGSPERHNLFVSSLFHKSFVQVDEEGTEAAAASAAV 217
Query: 192 XESLSAVISEPTVFDANHPFVFFLTGE--GVNLFNG 91
SA ++ F A+HPF+F + + GV LF G
Sbjct: 218 VSFRSAPVT--VDFVADHPFLFLIREDMTGVVLFIG 251
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 65.7 bits (153), Expect = 3e-11
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 11/217 (5%)
Frame = -3
Query: 708 NAIYFKGAWSXKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPYK 529
+A+YF+G W + D R T+++ FY +++VP + D + N ++I++PYK
Sbjct: 177 SALYFRGRWLDRDDLRRTTEQKFYCLDGTSVEVP--FVEYDRTRLFAVHDNFKVIKLPYK 234
Query: 528 GDQS----SLIVVLPKDKDGITQL-QEALKDPKTLETAQQSMYSTEVDLYLPKFKIETET 364
++ S+ + LP D DG+ +L Q+ +P LE V + +P FKI +
Sbjct: 235 QGKNERKFSMYIFLPDDHDGLFELTQKIFSEPMFLE-QHLPTEKCHVGISVPNFKISFQI 293
Query: 363 NLKDVLSNMNVNKIFNNDAQITRLLKGES----LSVSEAIQKXXXXXXXXXXXXXXXXXX 196
++KD L +M + F +A+ + ++K + L +S+ + K
Sbjct: 294 DVKDFLKDMGLELPFLREAEFSDMIKEDDSSGPLFLSDVLHKAVLEVDQKGIEETSVSMG 353
Query: 195 XXESLSAVISEPTVFDANHPFVFFLTGE--GVNLFNG 91
+ L A F A+HPF F + E G +F G
Sbjct: 354 LGKPLPA-----QHFKADHPFFFMIREEVSGTVIFMG 385
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 53.2 bits (122), Expect = 2e-07
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Frame = -3
Query: 708 NAIYFKGAWSXKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPY- 532
NA+YFKG W KFD R TSD FY+ + P M G ++Y + +++ +PY
Sbjct: 176 NALYFKGDWESKFDARSTSDDVFYLPDGGHVSAPFM-SSGKWQY-IACRAGYKVLRLPYA 233
Query: 531 ---------KGDQSSLIVVLPKDKDGI-TQLQEALKDPKTL-ETAQQSMYSTEVDLYL-P 388
G S+ + LP ++ G+ L++ DP L E++ V ++ P
Sbjct: 234 RGGRGRGRDTGRLFSMYIYLPDERHGLPDMLRKLCSDPAALIESSAALTEKVPVGAFMVP 293
Query: 387 KFKIETETNLKDVLSNMNVNKIF 319
+F + +TN + L + + F
Sbjct: 294 RFTLSYKTNAAETLRQLGLRLPF 316
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 52.4 bits (120), Expect = 3e-07
Identities = 53/232 (22%), Positives = 91/232 (39%), Gaps = 32/232 (13%)
Frame = -3
Query: 711 VNAIYFKGAWSXKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPY 532
VNAIYFKG WS F T+ F+ ++ P M R D G +++++PY
Sbjct: 158 VNAIYFKGKWSNPFPRERTTTGKFHRLDGSSVDAPFMSSREDQYIGFYD--GFKVLKLPY 215
Query: 531 K---------GDQS-------------SLIVVLPKDKDGITQLQEALKDPKTLETAQQSM 418
GD + S+ + LP +DG+ L + + + TA S
Sbjct: 216 HRTMKNHGDGGDITPAILKHYGENVGLSMYIFLPDARDGLPALVDKMAVASS-GTASSSF 274
Query: 417 YSTEV---------DLYLPKFKIETETNLKDVLSNMNVNKIFN-NDAQITRLLKGESLSV 268
DL +P+FK+ + + +VL M + F+ ++ ++ GE + V
Sbjct: 275 LRDHRPGRRRIKVGDLRVPRFKVSFYSEMNEVLKGMGIGAAFDVGKVDLSGMIDGELVVV 334
Query: 267 SEAIQKXXXXXXXXXXXXXXXXXXXXESLSAVISEPTVFDANHPFVFFLTGE 112
+ + + + L ++ P F A+HPF FF+ E
Sbjct: 335 EKVMHRAVVEVNEEGTEAAAATACTMKFLCLTLTSPVDFVADHPFAFFVVEE 386
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 50.0 bits (114), Expect = 2e-06
Identities = 62/247 (25%), Positives = 99/247 (40%), Gaps = 40/247 (16%)
Frame = -3
Query: 711 VNAIYFKGAWSXKFDERLTSDRDFYVSKDKTIKVPMMYKRGD---------------YKY 577
VNAIYFKG WS F T+ F+ ++ VP M R D Y +
Sbjct: 170 VNAIYFKGKWSNPFPRSSTTTGKFHRLDGSSVDVPFMSSREDQYIGFHDGFTVLKLPYHH 229
Query: 576 --------GESAVLNAQLIE--IPYKGDQS---SLIVVLPKDKDGITQLQEALKDPKTLE 436
G + N+ + + + G ++ S+ + LP ++DG+ L + + +
Sbjct: 230 RTMKNHGDGGDTITNSSITRAILEHYGGENVGLSMYIFLPDERDGLPALVDKMAASSSSS 289
Query: 435 TAQQSMYST---EV-DLYLPKFKIETETNLKDVLSNMNVNKIFN-NDAQITRLL-----K 286
+ + T EV DL +P+FK+ + + VL M V F+ +A ++ + +
Sbjct: 290 SFLRDHRPTRRREVGDLRVPRFKVSFYSQINGVLQGMGVTAAFDAGEADLSGMAEGVDQR 349
Query: 285 GESLSVSEAIQKXXXXXXXXXXXXXXXXXXXXESLSAVISEPTVFDANHPFVFFLTGE-- 112
G L V E + LS +S P F A+HPF FF+ E
Sbjct: 350 GGGLVVEEVFHRAVVEVNEEGTEAAASTACTIRLLS--MSYPEDFVADHPFAFFVVEETS 407
Query: 111 GVNLFNG 91
G LF G
Sbjct: 408 GAVLFAG 414
>05_06_0044 - 25150322-25151260
Length = 312
Score = 49.6 bits (113), Expect = 2e-06
Identities = 48/223 (21%), Positives = 90/223 (40%), Gaps = 17/223 (7%)
Frame = -3
Query: 708 NAIYFKGAWSXKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGE-SAVLNAQLIEIPY 532
N++YF W F LT + DF+VS D ++VP M + + + ++ + Y
Sbjct: 82 NSLYFNAYWDHPFFPHLTEEGDFHVSPDHDVRVPFMAGSHQHAFMDVGCHPGFNVLRMMY 141
Query: 531 K------GDQS-SLIVVLPKDKDGITQLQEAL-KDPKTL--ETAQQSMYSTEVDLYLPKF 382
+ GD+ ++ + LP D+DG+ +L L +P T + +L +PKF
Sbjct: 142 RTGGAAGGDKMFAMYIYLPDDRDGLPELARKLASNPAAFLRRTIVPAQPVAVGELKIPKF 201
Query: 381 KIETETNLKDVLSNMNVNKIF----NNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXX 214
++ + +L ++ F +N L + +VS + +
Sbjct: 202 EVSLKVEASRLLREFGLDLPFLPAADNSFSGMLLDPPQGTAVSSLLHQCFVNVNEEGTVA 261
Query: 213 XXXXXXXXESLSAVISEPTVFDANHPFVFFLTGE--GVNLFNG 91
+ + F A+HPF+FF+ E G+ +F G
Sbjct: 262 AAGTVGEIMGFAMPDDQIVDFVADHPFLFFIVEEVSGLVVFAG 304
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 45.6 bits (103), Expect = 4e-05
Identities = 35/146 (23%), Positives = 65/146 (44%), Gaps = 15/146 (10%)
Frame = -3
Query: 708 NAIYFKGAWSXKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPYK 529
NAIYFKG W FD+ T++R+F +++VP M + + + +++ +PYK
Sbjct: 93 NAIYFKGEWLAPFDKSDTAEREFRRLDGSSVEVPFMQRPSGSYHHVACHDGFRVLRLPYK 152
Query: 528 GDQS-------------SLIVVLPKDKDGITQLQEAL-KDPKTLETAQQSMYSTEVDLYL 391
+++V LP D+DG+ L + + P+ ++ +
Sbjct: 153 ATSDTYNLKLRYSLPSFAMLVFLPDDRDGLPGLLDRITASPEFVDEHLPPGCVPVGRFRV 212
Query: 390 PKFKIE-TETNLKDVLSNMNVNKIFN 316
PKFK+ + DVL + + F+
Sbjct: 213 PKFKLAFCHYGIADVLRGLGLRLPFD 238
>01_01_1152 + 9170628-9171899
Length = 423
Score = 43.2 bits (97), Expect = 2e-04
Identities = 47/223 (21%), Positives = 86/223 (38%), Gaps = 17/223 (7%)
Frame = -3
Query: 708 NAIYFKGAWSXKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPYK 529
NA++FKG WS F T F++ ++ P M ++ +A +++PYK
Sbjct: 194 NAVHFKGTWSLPFHPSATFHAPFHLLDGGAVRAPFMTTEIPFERHVAAFPGFTALKLPYK 253
Query: 528 -------GD----QSSLIVVLPKDKDGITQLQE----ALKDPKTLETAQQSMYSTEVDLY 394
GD + +++L D DG +L + A+ P+ ++ + + L
Sbjct: 254 NVGGGGGGDGVPRAAFYMLLLLPDGDGALKLADLYDMAVTTPEFIKKHTPAAEAPVRRLM 313
Query: 393 LPKFKIETETNLKDVLSNMNVNKIFNNDAQITRLLKGESLSVSEAIQKXXXXXXXXXXXX 214
+PKFK + K + + V + F + G+ L ++E +
Sbjct: 314 VPKFKFSFKFEAKSDMRKLGVTRAFAGGDFSGMVTGGDGLFIAEVYHQATIEVDELGTVA 373
Query: 213 XXXXXXXXESLSAVISEPTVFDANHPFVFFLTGE--GVNLFNG 91
+ + P F A+ PF+F + E G LF G
Sbjct: 374 AASTAVVMMQKGSSL-PPVDFVADRPFLFAVVEELTGAVLFLG 415
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = -3
Query: 711 VNAIYFKGAWSXKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPY 532
VNAIYFKG WS F T+ F+ ++ V M R D G N ++++PY
Sbjct: 120 VNAIYFKGKWSDPFPRESTTTGKFHRLDGSSVNVRFMRSREDQYIGFYDGFN--VLKLPY 177
Query: 531 KG 526
G
Sbjct: 178 NG 179
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 37.9 bits (84), Expect = 0.008
Identities = 31/143 (21%), Positives = 59/143 (41%), Gaps = 12/143 (8%)
Frame = -3
Query: 708 NAIYFKGAWSXKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPYK 529
NA++FK W KF+ T R F+ + VP + + L +++++ YK
Sbjct: 154 NAMHFKATWGRKFESYDTQRRRFHRQDGTRVTVPFLSDPRTHYAARFDGLGFKVLQLFYK 213
Query: 528 --GDQSS---------LIVVLPKDKDGITQ-LQEALKDPKTLETAQQSMYSTEVDLYLPK 385
G ++V LP +DG+ L+ A+ +P + +PK
Sbjct: 214 MVGHDGQVHFGAPCFCMLVFLPIKRDGLRHLLRMAVTEPDFVMRCVPRSEQEVSPCMVPK 273
Query: 384 FKIETETNLKDVLSNMNVNKIFN 316
FK +E + + L+ + + F+
Sbjct: 274 FKFSSELDARGALAKLGLGAPFD 296
>11_01_0771 + 6453130-6454488
Length = 452
Score = 33.5 bits (73), Expect = 0.17
Identities = 54/229 (23%), Positives = 89/229 (38%), Gaps = 30/229 (13%)
Frame = -3
Query: 708 NAIYFKGAWSXKFDERLTSDRDFY-----VSKDKTIKVPMM----YKR----GDYKYGES 568
NAIYFKG W F+E T + FY + VP M Y+R +K +
Sbjct: 208 NAIYFKGKWDRPFNESDTERKPFYRHDGAAAAAAVADVPYMSSRSYQRVAVHDGFKVLKL 267
Query: 567 AVLNAQLIEIPYK----GD------QSSLIVVLPKDKDGITQLQEALKD-PKTLETAQQS 421
+ +L+ K GD + ++ + LP +DG+ L E + P L +
Sbjct: 268 RYRSPRLLRDKRKRGGGGDVGGEFTRYAMAIFLPDARDGLRGLVERMASRPGFLHEHMPA 327
Query: 420 MYSTEV-DLYLPKFKIETETNLKDVLSNMNVNKIFNND-AQITRLLK----GESLSVSEA 259
+ V + +PKFK+ ++ L + + F+ + A ++ +++ G L V +
Sbjct: 328 AWPVPVGEFRVPKFKVSCGGSVVGALEQLGLRLPFSPELADLSDMVEDDGSGWPLFVGD- 386
Query: 258 IQKXXXXXXXXXXXXXXXXXXXXESLSAVISEPTVFDANHPFVFFLTGE 112
IQ S V P F A HPF +F+ E
Sbjct: 387 IQHKAVIEVNEEGTVAAAATMTRMLPSGVPPPPVDFVAEHPFAYFIVEE 435
>07_01_0464 -
3504264-3504475,3504842-3505031,3505310-3505408,
3505561-3505653,3505926-3506891,3507267-3507485,
3508038-3508247,3508371-3508630,3508956-3510737,
3510796-3511009
Length = 1414
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = -3
Query: 447 KTLETAQQSMYSTEVDLYLP-KFKIETETNL 358
K +E A Q +YSTEV+L+ F +ET+T L
Sbjct: 809 KGMEEADQKIYSTEVNLHSQYYFYMETQTAL 839
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,831,541
Number of Sequences: 37544
Number of extensions: 254591
Number of successful extensions: 487
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 478
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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