Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_E15
(690 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein. 57 1e-08
Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical pr... 34 0.11
U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein. 34 0.11
Z75554-9|CAA99952.2| 278|Caenorhabditis elegans Hypothetical pr... 32 0.34
Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical p... 31 1.0
U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein. 31 1.0
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 30 1.4
Z83239-4|CAB05808.1| 336|Caenorhabditis elegans Hypothetical pr... 29 3.1
U64834-3|AAB04824.1| 437|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical pr... 28 5.5
U80440-4|AAK21471.1| 186|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA ... 27 9.6
AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid de... 27 9.6
>Z49068-8|CAA88861.1| 540|Caenorhabditis elegans Hypothetical
protein K01C8.10 protein.
Length = 540
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = -1
Query: 690 VXVRRGRVTDMRTEHVLQPLHVTASALALATETVRAILKIDDII 559
V VR+G VTDM E V+QPL VTASA+ A+E VR+ILKIDDI+
Sbjct: 493 VNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIV 536
>U25697-1|AAA92842.1| 540|Caenorhabditis elegans CCT-4 protein.
Length = 540
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/44 (65%), Positives = 35/44 (79%)
Frame = -1
Query: 690 VXVRRGRVTDMRTEHVLQPLHVTASALALATETVRAILKIDDII 559
V VR+G VTDM E V+QPL VTASA+ A+E VR+ILKIDDI+
Sbjct: 493 VNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIV 536
>Z35599-3|CAA84660.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -1
Query: 663 DMRTEHVLQPLHVTASALALATETVRAILKIDDI 562
DM+ + V++ L ++LAT+ VR ILKIDD+
Sbjct: 499 DMKEQKVIETLLSKREQISLATQVVRMILKIDDV 532
>Z32840-7|CAA83681.1| 542|Caenorhabditis elegans Hypothetical
protein C07G2.3a protein.
Length = 542
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -1
Query: 663 DMRTEHVLQPLHVTASALALATETVRAILKIDDI 562
DM+ + V++ L ++LAT+ VR ILKIDD+
Sbjct: 499 DMKEQKVIETLLSKREQISLATQVVRMILKIDDV 532
>Z32840-6|CAD01079.1| 336|Caenorhabditis elegans Hypothetical
protein C07G2.3b protein.
Length = 336
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -1
Query: 663 DMRTEHVLQPLHVTASALALATETVRAILKIDDI 562
DM+ + V++ L ++LAT+ VR ILKIDD+
Sbjct: 293 DMKEQKVIETLLSKREQISLATQVVRMILKIDDV 326
>U25698-1|AAA92843.1| 542|Caenorhabditis elegans CCT-5 protein.
Length = 542
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -1
Query: 663 DMRTEHVLQPLHVTASALALATETVRAILKIDDI 562
DM+ + V++ L ++LAT+ VR ILKIDD+
Sbjct: 499 DMKEQKVIETLLSKREQISLATQVVRMILKIDDV 532
>Z75554-9|CAA99952.2| 278|Caenorhabditis elegans Hypothetical
protein ZC455.11 protein.
Length = 278
Score = 32.3 bits (70), Expect = 0.34
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -3
Query: 328 SLSKSTYLSHSKGNKSILLIY*VGNISLSNHVVRNFVGDW 209
+LS + Y+ HS G IL+I+ N+ L+ H++R FV DW
Sbjct: 3 NLSTAYYVFHSVG---ILMIF--SNLVLNLHILRKFVNDW 37
>Z66500-12|CAA91308.1| 549|Caenorhabditis elegans Hypothetical
protein T05C12.7 protein.
Length = 549
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 684 VRRGRVTDMRTEHVLQPLHVTASALALATETVRAILKIDDII 559
+ G + D + +L+P +L ATE IL+IDD+I
Sbjct: 493 LEEGTIRDNKEAGILEPALSKVKSLKFATEAAITILRIDDLI 534
>U07941-1|AAB05072.1| 549|Caenorhabditis elegans CCT-1 protein.
Length = 549
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -1
Query: 684 VRRGRVTDMRTEHVLQPLHVTASALALATETVRAILKIDDII 559
+ G + D + +L+P +L ATE IL+IDD+I
Sbjct: 493 LEEGTIRDNKEAGILEPALSKVKSLKFATEAAITILRIDDLI 534
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -1
Query: 675 GRVTDMRTEHVLQPLHVTASALALATETVRAILKIDDIIN 556
G + DM + PL V L A ET +L+IDDI++
Sbjct: 488 GDLVDMNKLEIWDPLAVRIQVLKTAIETSVMLLRIDDIVS 527
>Z83239-4|CAB05808.1| 336|Caenorhabditis elegans Hypothetical
protein T09F5.8 protein.
Length = 336
Score = 29.1 bits (62), Expect = 3.1
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +1
Query: 529 SSPFWLIHCIYNVINFEYSTHSFGCEC--ERGSCNMKRLQH-MLRAHICNS 672
+ P++ C+Y + F + H FG C R S MK ++ M H NS
Sbjct: 7 NEPYYFSLCLYTIGMFSFPIHLFGAYCILFRTSIAMKHVKWVMFNLHFWNS 57
>U64834-3|AAB04824.1| 437|Caenorhabditis elegans Hypothetical
protein F54D11.1 protein.
Length = 437
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -3
Query: 298 SKGNKSILLIY*VGNISLSNHVVRNFVGDWLPVFHKDVLFWATASII 158
S GN + L +Y V + SN+V +NF+ D++ VF K V T + I
Sbjct: 131 SDGNNTGLDLYTVDQVEHSNYVEQNFL-DFIFVFRKKVFAPTTDATI 176
>Z67735-2|CAA91530.2| 403|Caenorhabditis elegans Hypothetical
protein C15A7.1 protein.
Length = 403
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 283 IYSPYYAINTCFSIENTLLDVYASPILVDHIVS 381
+Y+P I TC I L YA P+LV +++S
Sbjct: 270 LYAPMIFICTCLIISGFLPSEYALPLLVFNLIS 302
>U80440-4|AAK21471.1| 186|Caenorhabditis elegans Hypothetical
protein T21E12.5 protein.
Length = 186
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/56 (21%), Positives = 30/56 (53%)
Frame = -1
Query: 435 QSATNKMKHEKIFLRYSARYDVINQYWRRINVQQGVLYRKARIYRIVRGINPSYSS 268
+S + ++ + F Y++ + + NQ +IN + + + ++ +V G+NP +S
Sbjct: 130 ESTLSLIRQKSYFDAYASDFIIRNQQNEKINTVKDEMDAEEMVHHLVHGMNPHKNS 185
>AF260243-1|AAF97549.1| 338|Caenorhabditis elegans stearoyl-CoA
desaturase FAT-7 protein.
Length = 338
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 359 YWLITSYLAEYLRNIFSCFILLVADWCVTS 448
+W T+++A Y+ F L A WC+ S
Sbjct: 213 FWKETAFIAFYVAGTFRYCFTLHATWCINS 242
>AF022972-8|AAC48239.1| 338|Caenorhabditis elegans Fatty acid
desaturase protein 7 protein.
Length = 338
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +2
Query: 359 YWLITSYLAEYLRNIFSCFILLVADWCVTS 448
+W T+++A Y+ F L A WC+ S
Sbjct: 213 FWKETAFIAFYVAGTFRYCFTLHATWCINS 242
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,102,252
Number of Sequences: 27780
Number of extensions: 310277
Number of successful extensions: 846
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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