Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_E10
         (837 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC007991-1|AAH07991.1|  518|Homo sapiens chromosome 15 open read...   182   1e-45
AK027475-1|BAB55140.1|  518|Homo sapiens protein ( Homo sapiens ...   182   1e-45
AL662844-6|CAM25631.1|  255|Homo sapiens coiled-coil alpha-helic...    33   1.3  
AL662833-1|CAM24808.1|  255|Homo sapiens coiled-coil alpha-helic...    33   1.3  

>BC007991-1|AAH07991.1|  518|Homo sapiens chromosome 15 open reading
           frame 44 protein.
          Length = 518

 Score =  182 bits (443), Expect = 1e-45
 Identities = 104/253 (41%), Positives = 141/253 (55%), Gaps = 7/253 (2%)
 Frame = -3

Query: 835 SNQLHIIGFIQXQDLGTPIAISKHXVIPQAQINNNTXGREXYGSKTPTKDGXXXXXXXXX 656
           +  L I+GFI   D+ +P  +S+H V+P A    N  G E     T   +          
Sbjct: 248 NTDLEIVGFIDIADISSPPVLSRHLVLPIAL---NKEGDEVGTGITDDNEDENSANQIA- 303

Query: 655 XEMSDPSKIPNFCVLLHGALKVEGMSAIILLGTEWWGTLSAWCEASRARRSCLLLSVLKP 476
                  KIPNFCVLLHG+LKVEGM AI+ LG EW G L  + +A   ++S L++S+ +P
Sbjct: 304 ------GKIPNFCVLLHGSLKVEGMVAIVQLGPEWHGML--YSQADSKKKSNLMMSLFEP 355

Query: 475 GVSAAPWLGPLDQLGP-------PEEGSAPTEVFPVRAWRSYXXXXXXXSTWARPHALLA 317
           G    PWLG + QLGP       P         FP++  ++        + W +P  L  
Sbjct: 356 GPEPLPWLGKMAQLGPISDAKENPYGEDDNKSPFPLQP-KNKRSYAQNVTVWIKPSGLQT 414

Query: 316 DVQKVLRHARKLPDKTQHLYKELNRLRRSAISLGFSELLTCVSTALERECSALPSNAPPE 137
           DVQK+LR+ARKLP+KTQ  YKELNRLR++A++ GF +LL  V+  LEREC+ LP  A P+
Sbjct: 415 DVQKILRNARKLPEKTQTFYKELNRLRKAALAFGFLDLLKGVADMLERECTLLPETAHPD 474

Query: 136 CALQLAHAIAALR 98
            A QL HA   L+
Sbjct: 475 AAFQLTHAAQQLK 487


>AK027475-1|BAB55140.1|  518|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14569 fis, clone NT2RM4000514. ).
          Length = 518

 Score =  182 bits (443), Expect = 1e-45
 Identities = 104/253 (41%), Positives = 141/253 (55%), Gaps = 7/253 (2%)
 Frame = -3

Query: 835 SNQLHIIGFIQXQDLGTPIAISKHXVIPQAQINNNTXGREXYGSKTPTKDGXXXXXXXXX 656
           +  L I+GFI   D+ +P  +S+H V+P A    N  G E     T   +          
Sbjct: 248 NTDLEIVGFIDIADISSPPVLSRHLVLPIAL---NKEGDEVGTGITDDNEDENSANQIA- 303

Query: 655 XEMSDPSKIPNFCVLLHGALKVEGMSAIILLGTEWWGTLSAWCEASRARRSCLLLSVLKP 476
                  KIPNFCVLLHG+LKVEGM AI+ LG EW G L  + +A   ++S L++S+ +P
Sbjct: 304 ------GKIPNFCVLLHGSLKVEGMVAIVQLGPEWHGML--YSQADSKKKSNLMMSLFEP 355

Query: 475 GVSAAPWLGPLDQLGP-------PEEGSAPTEVFPVRAWRSYXXXXXXXSTWARPHALLA 317
           G    PWLG + QLGP       P         FP++  ++        + W +P  L  
Sbjct: 356 GPEPLPWLGKMAQLGPISDAKENPYGEDDNKSPFPLQP-KNKRSYAQNVTVWIKPSGLQT 414

Query: 316 DVQKVLRHARKLPDKTQHLYKELNRLRRSAISLGFSELLTCVSTALERECSALPSNAPPE 137
           DVQK+LR+ARKLP+KTQ  YKELNRLR++A++ GF +LL  V+  LEREC+ LP  A P+
Sbjct: 415 DVQKILRNARKLPEKTQTFYKELNRLRKAALAFGFLDLLKGVADMLERECTLLPETAHPD 474

Query: 136 CALQLAHAIAALR 98
            A QL HA   L+
Sbjct: 475 AAFQLTHAAQQLK 487


>AL662844-6|CAM25631.1|  255|Homo sapiens coiled-coil alpha-helical
           rod protein 1 protein.
          Length = 255

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 21/70 (30%), Positives = 37/70 (52%)
 Frame = -3

Query: 316 DVQKVLRHARKLPDKTQHLYKELNRLRRSAISLGFSELLTCVSTALERECSALPSNAPPE 137
           +++++   ARK  ++ Q L + L  L R   +L    LLT + + L+++ S + S  PPE
Sbjct: 140 ELRRLQEEARK--EEGQRLARRLQELERDK-NLMLQRLLTVLPSLLDKKKSVVSSPRPPE 196

Query: 136 CALQLAHAIA 107
           C+     A A
Sbjct: 197 CSASAPVAAA 206


>AL662833-1|CAM24808.1|  255|Homo sapiens coiled-coil alpha-helical
           rod protein 1 protein.
          Length = 255

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 21/70 (30%), Positives = 37/70 (52%)
 Frame = -3

Query: 316 DVQKVLRHARKLPDKTQHLYKELNRLRRSAISLGFSELLTCVSTALERECSALPSNAPPE 137
           +++++   ARK  ++ Q L + L  L R   +L    LLT + + L+++ S + S  PPE
Sbjct: 140 ELRRLQEEARK--EEGQRLARRLQELERDK-NLMLQRLLTVLPSLLDKKKSVVSSPRPPE 196

Query: 136 CALQLAHAIA 107
           C+     A A
Sbjct: 197 CSASAPVAAA 206


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,255,430
Number of Sequences: 237096
Number of extensions: 2697860
Number of successful extensions: 6998
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6970
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)