Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_E10
         (837 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82268-2|CAD89737.1|  389|Caenorhabditis elegans Hypothetical pr...    31   0.77 
Z82268-1|CAB05197.3|  508|Caenorhabditis elegans Hypothetical pr...    31   0.77 
U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z81453-7|CAB03797.2|  457|Caenorhabditis elegans Hypothetical pr...    28   9.5  
AF264764-1|AAQ14296.1|  457|Caenorhabditis elegans sterol reduct...    28   9.5  

>Z82268-2|CAD89737.1|  389|Caenorhabditis elegans Hypothetical
           protein F52B11.1b protein.
          Length = 389

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 159 CHLMHHLNAHYSWHMLLLRYGIQEQPSI 76
           CH MH LNAH  W    L   + +QP+I
Sbjct: 296 CHEMHKLNAHAEWTTNALSIMMHKQPNI 323


>Z82268-1|CAB05197.3|  508|Caenorhabditis elegans Hypothetical
           protein F52B11.1a protein.
          Length = 508

 Score = 31.5 bits (68), Expect = 0.77
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 159 CHLMHHLNAHYSWHMLLLRYGIQEQPSI 76
           CH MH LNAH  W    L   + +QP+I
Sbjct: 415 CHEMHKLNAHAEWTTNALSIMMHKQPNI 442


>U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical
           protein C27A2.1 protein.
          Length = 1076

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = +2

Query: 329 VRSCPSATRSSTATIRAPSSDRKYFSWRTSFFRWSQLVKRAE 454
           +R   S +R +  T+++ S+ R+  +WR  FF+ S + KR +
Sbjct: 585 IRCQNSKSRYANNTLQSQSATREANTWRDQFFKVSPVAKRTD 626


>Z81453-7|CAB03797.2|  457|Caenorhabditis elegans Hypothetical
           protein B0250.9 protein.
          Length = 457

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = -3

Query: 256 KELNRLRRSAISLGFSELLTCVSTALERECSALPSNAPPE--CALQLAHAIAALRDPRTA 83
           KELNR+RRS++  G +  LT  S+  +++  AL      +   + Q+  A+  +  P T 
Sbjct: 2   KELNRIRRSSLG-GSTSSLTRRSSISQKDIQALQETLQKQQKVSAQMVLALLIIVPPATF 60

Query: 82  F 80
           F
Sbjct: 61  F 61


>AF264764-1|AAQ14296.1|  457|Caenorhabditis elegans sterol reductase
           protein.
          Length = 457

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
 Frame = -3

Query: 256 KELNRLRRSAISLGFSELLTCVSTALERECSALPSNAPPE--CALQLAHAIAALRDPRTA 83
           KELNR+RRS++  G +  LT  S+  +++  AL      +   + Q+  A+  +  P T 
Sbjct: 2   KELNRIRRSSLG-GSTSSLTRRSSISQKDIQALQETLQKQQKVSAQMVLALLIIVPPATF 60

Query: 82  F 80
           F
Sbjct: 61  F 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,039,874
Number of Sequences: 27780
Number of extensions: 396534
Number of successful extensions: 1312
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1312
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)