Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_E10
         (837 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          24   2.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   6.1  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    22   6.1  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   8.1  

>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +3

Query: 480 FRTLRSKQERRALDASHHAESVPHHSVPSSIIADIPS 590
           +R  R     R+ D      S  H  +PS  I  IP+
Sbjct: 304 YREYRETSRERSRDRRGRGRSREHRIIPSHYIEQIPA 340


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -3

Query: 328 ALLADVQKVLRHARKLPDKTQHLY 257
           A L  +  + RH  ++PD+   +Y
Sbjct: 15  AELKQINVIFRHGDRIPDEKNEMY 38


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 741 IWACGITXCLLMAIGVP 791
           IWACG+   +L+ +G P
Sbjct: 95  IWACGVILYILL-VGYP 110


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 6/22 (27%), Positives = 12/22 (54%)
 Frame = -3

Query: 322 LADVQKVLRHARKLPDKTQHLY 257
           L  +  + RH  ++PD+   +Y
Sbjct: 2   LKQINVIFRHGDRIPDEKNEMY 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,804
Number of Sequences: 438
Number of extensions: 4884
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)