Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_E04
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical pr... 232 2e-61
L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein ( Caeno... 230 6e-61
AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin, mu/m... 214 6e-56
Z83115-5|CAJ85757.1| 58|Caenorhabditis elegans Hypothetical pr... 109 3e-24
L26290-1|AAA27981.1| 441|Caenorhabditis elegans clathrin-associ... 83 2e-16
AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : short... 83 2e-16
AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : short... 83 2e-16
U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/med... 47 2e-05
U21309-2|AAN73882.1| 515|Caenorhabditis elegans Hypothetical pr... 35 0.066
Z70271-1|CAB61041.1| 393|Caenorhabditis elegans Hypothetical pr... 28 5.7
AF103732-1|AAD03603.1| 393|Caenorhabditis elegans Wnt homolog p... 28 5.7
AF068713-11|AAC17792.1| 315|Caenorhabditis elegans Serpentine r... 28 7.5
Z72514-5|CAA96679.5| 818|Caenorhabditis elegans Hypothetical pr... 27 9.9
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z83115-4|CAB05557.3| 422|Caenorhabditis elegans Hypothetical
protein K11D2.3a protein.
Length = 422
Score = 232 bits (568), Expect = 2e-61
Identities = 105/125 (84%), Positives = 117/125 (93%)
Frame = -1
Query: 705 AKSQFKRRSTANNVEIIIPVPADADSPKFKTTIGSVKYTPEQNAITWSIKSFPGGKEYLM 526
AKSQFKRRSTANNVEIIIPVP+DADSPKFKT+IGSVKYTPEQ+A W+IK+FPGGKEYL+
Sbjct: 296 AKSQFKRRSTANNVEIIIPVPSDADSPKFKTSIGSVKYTPEQSAFVWTIKNFPGGKEYLL 355
Query: 525 RAHFGLPSVECEEVDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNG 346
AH LPSV EE +G+PPI+VKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNG
Sbjct: 356 TAHLSLPSVMSEESEGRPPIKVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNG 415
Query: 345 DYQLR 331
+Y++R
Sbjct: 416 EYEMR 420
>L26291-1|AAA72418.1| 422|Caenorhabditis elegans protein (
Caenorhabditis elegans(unc-101) mRNA, complete cds. ).
Length = 422
Score = 230 bits (563), Expect = 6e-61
Identities = 104/125 (83%), Positives = 116/125 (92%)
Frame = -1
Query: 705 AKSQFKRRSTANNVEIIIPVPADADSPKFKTTIGSVKYTPEQNAITWSIKSFPGGKEYLM 526
AKSQFKRRSTANNVEIIIPVP+DADSPKFKT+IGSVKYTPEQ+A W+IK+FPGGKEYL+
Sbjct: 296 AKSQFKRRSTANNVEIIIPVPSDADSPKFKTSIGSVKYTPEQSAFVWTIKNFPGGKEYLL 355
Query: 525 RAHFGLPSVECEEVDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNG 346
AH LPSV EE +G+PPI+VKFEIPYFTTSGIQVRYLKIIEK GYQALPWVRYITQNG
Sbjct: 356 TAHLSLPSVMSEESEGRPPIKVKFEIPYFTTSGIQVRYLKIIEKRGYQALPWVRYITQNG 415
Query: 345 DYQLR 331
+Y++R
Sbjct: 416 EYEMR 420
>AF003130-2|AAB54125.2| 426|Caenorhabditis elegans Adaptin,
mu/medium chain (clathrinassociated complex) protein 1
protein.
Length = 426
Score = 214 bits (522), Expect = 6e-56
Identities = 93/125 (74%), Positives = 111/125 (88%)
Frame = -1
Query: 705 AKSQFKRRSTANNVEIIIPVPADADSPKFKTTIGSVKYTPEQNAITWSIKSFPGGKEYLM 526
AKSQFKR+S AN+VE+IIPVP+D +PKFKT G+ KY PE NAI WSI+SFPGG+EY+M
Sbjct: 300 AKSQFKRQSVANHVEVIIPVPSDVSAPKFKTGAGTAKYVPELNAIVWSIRSFPGGREYIM 359
Query: 525 RAHFGLPSVECEEVDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNG 346
R+ F LPS+ EE++G+PPI VKFEIPY+TTSG+QVRYLKIIEKSGYQALPWVRY+TQNG
Sbjct: 360 RSSFMLPSIGSEELEGRPPINVKFEIPYYTTSGLQVRYLKIIEKSGYQALPWVRYVTQNG 419
Query: 345 DYQLR 331
DYQ+R
Sbjct: 420 DYQMR 424
>Z83115-5|CAJ85757.1| 58|Caenorhabditis elegans Hypothetical
protein K11D2.3b protein.
Length = 58
Score = 109 bits (261), Expect = 3e-24
Identities = 47/54 (87%), Positives = 53/54 (98%)
Frame = -1
Query: 492 EEVDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLR 331
EE +G+PPI+VKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNG+Y++R
Sbjct: 3 EESEGRPPIKVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGEYEMR 56
>L26290-1|AAA27981.1| 441|Caenorhabditis elegans
clathrin-associated protein homologueprotein.
Length = 441
Score = 82.6 bits (195), Expect = 2e-16
Identities = 48/130 (36%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Frame = -1
Query: 702 KSQFKRRSTANNVEIIIPVPADADSPKFKTTIGSVKYTPEQNAITWSIKSFPGGKEYLMR 523
KS FK A +E+ IP P + + G KY +NAI W IK G KE +
Sbjct: 312 KSNFKPSLLAQKLEVRIPTPPNTSGVQLICMKGKAKYKAGENAIVWKIKRMAGMKESQIS 371
Query: 522 AHFGLPSVECEEVD--GKPPIQVKFEIPYFTTSGIQVRYLKIIEK----SGYQALPWVRY 361
A L S E +PP+ + FE+P F SG++VRYLK+ E S + + WVRY
Sbjct: 372 AEIDLLSTGNVEKKKWNRPPVSMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRY 430
Query: 360 ITQNGDYQLR 331
I ++G Y+ R
Sbjct: 431 IGRSGLYETR 440
>AF099001-8|AAP13778.1| 435|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform b protein.
Length = 435
Score = 82.6 bits (195), Expect = 2e-16
Identities = 48/130 (36%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Frame = -1
Query: 702 KSQFKRRSTANNVEIIIPVPADADSPKFKTTIGSVKYTPEQNAITWSIKSFPGGKEYLMR 523
KS FK A +E+ IP P + + G KY +NAI W IK G KE +
Sbjct: 306 KSNFKPSLLAQKLEVRIPTPPNTSGVQLICMKGKAKYKAGENAIVWKIKRMAGMKESQIS 365
Query: 522 AHFGLPSVECEEVD--GKPPIQVKFEIPYFTTSGIQVRYLKIIEK----SGYQALPWVRY 361
A L S E +PP+ + FE+P F SG++VRYLK+ E S + + WVRY
Sbjct: 366 AEIDLLSTGNVEKKKWNRPPVSMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRY 424
Query: 360 ITQNGDYQLR 331
I ++G Y+ R
Sbjct: 425 IGRSGLYETR 434
>AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform a protein.
Length = 441
Score = 82.6 bits (195), Expect = 2e-16
Identities = 48/130 (36%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Frame = -1
Query: 702 KSQFKRRSTANNVEIIIPVPADADSPKFKTTIGSVKYTPEQNAITWSIKSFPGGKEYLMR 523
KS FK A +E+ IP P + + G KY +NAI W IK G KE +
Sbjct: 312 KSNFKPSLLAQKLEVRIPTPPNTSGVQLICMKGKAKYKAGENAIVWKIKRMAGMKESQIS 371
Query: 522 AHFGLPSVECEEVD--GKPPIQVKFEIPYFTTSGIQVRYLKIIEK----SGYQALPWVRY 361
A L S E +PP+ + FE+P F SG++VRYLK+ E S + + WVRY
Sbjct: 372 AEIDLLSTGNVEKKKWNRPPVSMNFEVP-FAPSGLKVRYLKVFEPKLNYSDHDVIKWVRY 430
Query: 360 ITQNGDYQLR 331
I ++G Y+ R
Sbjct: 431 IGRSGLYETR 440
>U41023-4|AAA82343.2| 414|Caenorhabditis elegans Adaptin, mu/medium
chain (clathrinassociated complex) protein 3 protein.
Length = 414
Score = 46.8 bits (106), Expect = 2e-05
Identities = 30/114 (26%), Positives = 53/114 (46%)
Frame = -1
Query: 669 NVEIIIPVPADADSPKFKTTIGSVKYTPEQNAITWSIKSFPGGKEYLMRAHFGLPSVECE 490
+V + I +P + + G + + P + W+I GK ++ G +V
Sbjct: 305 DVVLEITMPKCVQNCNLVASHGRIAFDPTTKLLQWTIGKIEVGKPSTLK---GSVAVSGT 361
Query: 489 EVDGKPPIQVKFEIPYFTTSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQLRT 328
V PPI +KF+I SG++V L + + Y+ V+YIT+ G + +RT
Sbjct: 362 TVAENPPISLKFKINQLVLSGLKVNRLDMYGEK-YKPFKGVKYITKAGKFTIRT 414
>U21309-2|AAN73882.1| 515|Caenorhabditis elegans Hypothetical
protein C13B9.3 protein.
Length = 515
Score = 34.7 bits (76), Expect = 0.066
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = -1
Query: 678 TANNVEIIIPVPADADSPKFKTTIGSVKYTPEQNAITWSIKSFPGGKEYLMRAHFGLPSV 499
T NNV II+P+P A +P G +Y +N I WS+ F +P+
Sbjct: 408 TLNNVRIIVPLPT-ATAPSVGECDGEYEYHKTKNVIVWSLAVIDSSNS-SGTLEFSVPNG 465
Query: 498 ECE 490
C+
Sbjct: 466 HCD 468
>Z70271-1|CAB61041.1| 393|Caenorhabditis elegans Hypothetical
protein W08D2.1 protein.
Length = 393
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Frame = -1
Query: 603 SVKYTPEQNAITWSIKSFPGGKEYLMRAHFGLPSVE-----CEEVDGKPPIQ 463
S Y+ +Q W +F G +YL R H+ E C +DG P Q
Sbjct: 23 SATYSTQQVPYNWLTLAFVGSNDYLPRPHYHSTDREHFKELCRRLDGLNPNQ 74
>AF103732-1|AAD03603.1| 393|Caenorhabditis elegans Wnt homolog
protein.
Length = 393
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Frame = -1
Query: 603 SVKYTPEQNAITWSIKSFPGGKEYLMRAHFGLPSVE-----CEEVDGKPPIQ 463
S Y+ +Q W +F G +YL R H+ E C +DG P Q
Sbjct: 23 SATYSTQQVPYNWLTLAFVGSNDYLPRPHYHSTDREHFKELCRRLDGLNPNQ 74
>AF068713-11|AAC17792.1| 315|Caenorhabditis elegans Serpentine
receptor, class i protein21 protein.
Length = 315
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 382 LVSTFLNNFQISYLNSRSCEIRYFKFYLNW 471
++S F+N I + S+S I F++YL W
Sbjct: 22 IISVFINTLGIYLIKSQSGAIDSFRYYLLW 51
>Z72514-5|CAA96679.5| 818|Caenorhabditis elegans Hypothetical
protein T10B10.7 protein.
Length = 818
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -1
Query: 441 FTTSGIQVRYLKIIEKSGYQAL-PWVRYITQNGDYQL 334
F +S + ++++ G L PW++Y +GDY +
Sbjct: 3 FNSSDVPSTLYSLVDEQGGGILSPWIKYARSSGDYSI 39
>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical protein
C13F10.4 protein.
Length = 2076
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 137 IMLT*KKLSRRAPLDVICTFQFQFNKIIYFNHRYL 33
IM+T + AP+DV+ Q FNK+I R+L
Sbjct: 1851 IMVTAVVFTTSAPVDVVLGHQESFNKLIVLLKRHL 1885
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,603,231
Number of Sequences: 27780
Number of extensions: 298309
Number of successful extensions: 670
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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