Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_D23
         (600 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0633 + 23840427-23840562,23840699-23840768,23840846-238409...    32   0.31 
06_03_0545 + 21983666-21986086                                         29   2.8  
02_02_0141 - 7131260-7131581,7132124-7132430,7134018-7134076,713...    29   2.8  
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773...    28   6.6  
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748...    27   8.7  
05_06_0061 + 25274693-25274794,25274982-25275069,25275186-252752...    27   8.7  

>01_05_0633 +
           23840427-23840562,23840699-23840768,23840846-23840951,
           23841086-23841184,23841320-23841442,23841555-23842691
          Length = 556

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
 Frame = -1

Query: 495 KSDVENEGNLVVKLVEYETDPEVLQRRQKQIDYGKNTVGYQNYVQQIPLNKRTKELPKT- 319
           KS+V+ E N+    +   +    L +RQ  +  G N++G+ N VQQ   N+    LP T 
Sbjct: 377 KSNVQKE-NMAPNHLPSLSGFSNLDKRQSHVISGGNSIGHTNLVQQNSNNENV--LPSTQ 433

Query: 318 --PDKYLKYSRRSWDMLIKLWRKNLHEFDPNFGEVKKE-----CNDANKKVN 184
             P K     R+   +L K  R +L    P    ++KE     C+  N+K N
Sbjct: 434 LIPSKECNQGRKKLHLLSK--RLSLKSELPADKTIEKEYMQTDCSQNNRKPN 483


>06_03_0545 + 21983666-21986086
          Length = 806

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = -1

Query: 582 ESEDKITVTDKSXNSXTHSGEDSKNREKLKSDVENEGNLVVK 457
           +S+  + +TD S      +   S N E++++ + N GNL+VK
Sbjct: 90  KSDGSMVLTDNSGQIVWTNNVSSSNGEQVQAQLLNTGNLIVK 131


>02_02_0141 -
           7131260-7131581,7132124-7132430,7134018-7134076,
           7134586-7134667,7135972-7136047,7136382-7136443,
           7136946-7137006
          Length = 322

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -1

Query: 441 TDPEVLQRRQKQIDYGKNTVGYQNYVQQIPLNKRTKELPKTPDKYL 304
           +D   +Q   K+I Y K     ++Y   + +N+R+  LPK  +K +
Sbjct: 234 SDATCVQDLAKKITYNKRMKACKSYAAGLDMNQRSNHLPKPCNKMI 279


>10_08_0829 -
           20871810-20872011,20873226-20873359,20873480-20877313,
           20878057-20878177,20878414-20878451,20879096-20879218,
           20879308-20879505,20880270-20880356
          Length = 1578

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 303 KYSRRSWDMLIKLWRKNLHEFDPNFGEVKKECNDANKK 190
           K  +RS   L K+W++   +       +KKEC D +K+
Sbjct: 326 KSKQRSEQDLEKMWQRKTRKLKQGLETLKKECADKSKQ 363


>08_02_0259 -
           14974526-14974572,14974670-14974742,14974829-14974891,
           14975030-14975097,14975172-14975295,14976434-14976493,
           14976744-14976806,14976902-14977942,14978027-14978093,
           14978188-14978303,14978454-14978540,14978749-14978838,
           14979128-14979214,14979366-14979428,14979509-14979566,
           14980174-14980231,14980349-14980416,14980508-14980587,
           14981084-14981147,14981321-14981392,14981517-14981576,
           14982344-14982398,14982487-14982520,14983845-14983931,
           14984036-14984122,14984211-14984408,14984509-14984639,
           14984739-14984838
          Length = 1066

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/65 (23%), Positives = 31/65 (47%)
 Frame = -1

Query: 594 LEHEESEDKITVTDKSXNSXTHSGEDSKNREKLKSDVENEGNLVVKLVEYETDPEVLQRR 415
           L  EE  D  T+T  S  S   +   S+   + K++ +++GN   +    +     ++RR
Sbjct: 99  LADEEDNDAETITSTSRQSSASTSSKSRKHFRRKAEDQDDGNDDDETKIKQDSGRNVKRR 158

Query: 414 QKQID 400
            +++D
Sbjct: 159 TEEVD 163


>05_06_0061 +
           25274693-25274794,25274982-25275069,25275186-25275295,
           25275542-25275605,25275713-25275777,25275864-25275929,
           25276084-25276199,25276382-25276415
          Length = 214

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/53 (28%), Positives = 27/53 (50%)
 Frame = -1

Query: 390 NTVGYQNYVQQIPLNKRTKELPKTPDKYLKYSRRSWDMLIKLWRKNLHEFDPN 232
           +T G ++Y +  PL+ R  ++       +  SR S++ ++K W   L  F PN
Sbjct: 61  DTAGQEDYSRLRPLSYRGADIFVLAFSLI--SRASYENVLKKWMPELRRFAPN 111


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,021,621
Number of Sequences: 37544
Number of extensions: 225002
Number of successful extensions: 512
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)