Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_D17
         (481 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0647 - 19687142-19687145,19687244-19689352,19689764-19690617     29   1.5  
09_04_0290 - 16429495-16429559,16430040-16430316,16430410-164305...    29   2.6  

>08_02_0647 - 19687142-19687145,19687244-19689352,19689764-19690617
          Length = 988

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 160 SWKCPFCYITLFNLDRHLSYTR*PEFMPSYSSL 258
           SW  P C++ +F +  H  + R P +M S S L
Sbjct: 758 SWYPPPCHLEMFRMVSHFYFPRLPNWMSSLSEL 790


>09_04_0290 -
           16429495-16429559,16430040-16430316,16430410-16430571,
           16431308-16431926,16431976-16432172
          Length = 439

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +2

Query: 14  LAANPLHVFVSVQSXSIGXILXHLPETFKN--NIKFVNSFLGCCEL 145
           L    LH+FVS Q  +   IL  LP TF +  ++K +  ++  CEL
Sbjct: 259 LHVRKLHLFVSYQPSNGAKILETLPCTFDSLKSLKSLKLYMDFCEL 304


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,977,250
Number of Sequences: 37544
Number of extensions: 185998
Number of successful extensions: 343
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 343
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 991020332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)