Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_D17
         (481 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20297-1|AAA28860.1|  685|Drosophila melanogaster neurotrophic r...    28   7.6  
AE014134-1796|AAF52885.1|  685|Drosophila melanogaster CG4926-PA...    28   7.6  

>L20297-1|AAA28860.1|  685|Drosophila melanogaster neurotrophic
           receptor protein.
          Length = 685

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = -2

Query: 282 NISLNL--LKKARVRRHKLRSPSVREMSVKIKKSNVTERTFP*YCLHISSQQP 130
           N++ N   LK   +RR + +S  ++ +S+  KKS + E  F      ISS+ P
Sbjct: 119 NVATNAKQLKNVSIRRKRTKSKDIKNISIFKKKSTIYEDVF---STDISSKYP 168


>AE014134-1796|AAF52885.1|  685|Drosophila melanogaster CG4926-PA
           protein.
          Length = 685

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
 Frame = -2

Query: 282 NISLNL--LKKARVRRHKLRSPSVREMSVKIKKSNVTERTFP*YCLHISSQQP 130
           N++ N   LK   +RR + +S  ++ +S+  KKS + E  F      ISS+ P
Sbjct: 119 NVATNAKQLKNVSIRRKRTKSKDIKNISIFKKKSTIYEDVF---STDISSKYP 168


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,910,649
Number of Sequences: 53049
Number of extensions: 337062
Number of successful extensions: 693
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)