Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_D16
         (824 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0612 + 26117306-26118045,26118151-26118680,26119247-261192...    31   0.84 
04_04_1576 - 34551095-34552645                                         29   5.9  

>03_05_0612 +
           26117306-26118045,26118151-26118680,26119247-26119278,
           26119910-26121175
          Length = 855

 Score = 31.5 bits (68), Expect = 0.84
 Identities = 16/39 (41%), Positives = 19/39 (48%)
 Frame = +3

Query: 141 VLFVMAHFYRYQNLTAHKIKFKSHCLTCTLYRKV*NDKI 257
           VL    H  R  NL AH +   +   TCT+YR V  D I
Sbjct: 808 VLCSFMHVNRLSNLAAHSLARNAELSTCTVYRSVIPDYI 846


>04_04_1576 - 34551095-34552645
          Length = 516

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 716 NACINFMNANKFRALHDFLVKL 781
           NAC N  N N+ R +H +++KL
Sbjct: 353 NACANLANLNQGRKIHGYVIKL 374


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,737,651
Number of Sequences: 37544
Number of extensions: 341622
Number of successful extensions: 445
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 445
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)