Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_D10
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78412-7|CAB01652.1| 495|Caenorhabditis elegans Hypothetical pr... 33 0.26
L03524-1|AAA28152.1| 495|Caenorhabditis elegans protein-tyrosin... 33 0.26
AL132876-17|CAC48140.1| 934|Caenorhabditis elegans Hypothetical... 32 0.34
Z93785-1|CAB07858.1| 495|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical p... 29 2.4
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ... 29 2.4
U41995-1|AAA83459.1| 301|Caenorhabditis elegans Serpentine rece... 29 3.2
U64599-2|ABB88205.1| 420|Caenorhabditis elegans Unidentified vi... 28 5.6
AF036698-1|AAB88352.1| 425|Caenorhabditis elegans Hypothetical ... 28 5.6
U88167-1|AAB42226.1| 319|Caenorhabditis elegans Hypothetical pr... 27 9.8
CU457740-4|CAM36334.1| 735|Caenorhabditis elegans Hypothetical ... 27 9.8
AC006693-7|AAF60385.1| 201|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z78412-7|CAB01652.1| 495|Caenorhabditis elegans Hypothetical
protein M176.7 protein.
Length = 495
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -2
Query: 162 IPYLVNLANRSSYHEEAKEAALLNFYSNRRDRMNSAPDKYYNELIKE 22
I +LV RS E+ K AL+N YS+ RD ++ P++ N + +
Sbjct: 76 IAFLVWRLRRSKTQEKRKNMALMNIYSDLRDTGDAMPEELKNRPLND 122
>L03524-1|AAA28152.1| 495|Caenorhabditis elegans protein-tyrosine
kinase protein.
Length = 495
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -2
Query: 162 IPYLVNLANRSSYHEEAKEAALLNFYSNRRDRMNSAPDKYYNELIKE 22
I +LV RS E+ K AL+N YS+ RD ++ P++ N + +
Sbjct: 76 IAFLVWRLRRSKTQEKRKNMALMNIYSDLRDTGDAMPEELKNRPLND 122
>AL132876-17|CAC48140.1| 934|Caenorhabditis elegans Hypothetical
protein Y105E8A.21 protein.
Length = 934
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -2
Query: 570 PEDVFKLSLMQHMAAQFINLQAINRSKNRKQFMMALSFYTNHMSLFWDPDTC 415
P+D KLS A Q L A+ ++K + ++ YTNHMS+ + D C
Sbjct: 192 PDDFRKLS---KKAKQAYTLDAVTKNKGIVKCLVCDKEYTNHMSIIYHIDRC 240
>Z93785-1|CAB07858.1| 495|Caenorhabditis elegans Hypothetical
protein W09D10.1 protein.
Length = 495
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/48 (27%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = -2
Query: 405 PNDLANEHILASEQALKLFHPELPDEMER----EILKQFIKSKYDDLR 274
P + ++ +E+A +++ +LP + R + ++QFI+SKY+ R
Sbjct: 79 PEQVQTMRVMGNEKARQVYEHDLPAQFRRPTNDQQMEQFIRSKYEQKR 126
>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 29.5 bits (63), Expect = 2.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -3
Query: 356 NYFTPNCQMRWREKYLNSSSSRSMTICA 273
N + +C++RW K+L + ++ T+CA
Sbjct: 195 NPWNCDCRLRWMRKWLEKAEGQNKTVCA 222
>Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical
protein F44D12.1 protein.
Length = 1034
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 651 EYEAKYQESYRKAIETFDQRRNRPTEFPEDVFKLSLMQHMAAQF 520
E EAK+ E RKA E D + EF E + L + H + +
Sbjct: 7 EVEAKWMEKVRKASEERDDIGKKIDEFEEKIDSLQIQVHRSETY 50
>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
protein F40E10.4 protein.
Length = 1410
Score = 29.5 bits (63), Expect = 2.4
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = -3
Query: 356 NYFTPNCQMRWREKYLNSSSSRSMTICA 273
N + +C++RW K+L + ++ T+CA
Sbjct: 195 NPWNCDCRLRWMRKWLEKAEGQNKTVCA 222
>U41995-1|AAA83459.1| 301|Caenorhabditis elegans Serpentine
receptor, class x protein47 protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 205 LHFFYIHV-NSCSNSCFIRSIVQFAQIVIL-RLDELFKYFSLHLIWQ 339
LH F HV NSC N F ++ I+IL L +LF + L Q
Sbjct: 151 LHMFMYHVSNSCVNFSFYGIFCKYLTIIILILLIDLFSIYKARLFLQ 197
>U64599-2|ABB88205.1| 420|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 6, isoform b
protein.
Length = 420
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = -2
Query: 630 ESYRKAIET--FDQRRNRPTEFPEDVFKLSLMQHMAAQFINLQAINRSKNRKQFMMALSF 457
E++R A ++ F RRNRP PEDV S + NL + S K M S
Sbjct: 297 ENFRTAFKSLLFWSRRNRPLPLPEDVRSTSASTYY-RNSSNLDCLKSSLPIKSTMEPASV 355
Query: 456 Y 454
Y
Sbjct: 356 Y 356
>AF036698-1|AAB88352.1| 425|Caenorhabditis elegans Hypothetical
protein B0273.3 protein.
Length = 425
Score = 28.3 bits (60), Expect = 5.6
Identities = 33/149 (22%), Positives = 61/149 (40%), Gaps = 1/149 (0%)
Frame = -2
Query: 645 EAKYQESYRKAIETFDQRRNRPTEFPEDVFKLSLMQHMAAQFINLQAINRSKNRKQFMMA 466
E K S A E+F Q + ED+++ + H+++ N + + + A
Sbjct: 34 ECKLLASGSNARESFQQATGLSEKITEDIYRQIDVSHISSMVFNREMDGGIERNRLGSQA 93
Query: 465 LSFYTNHMSLFWDPDTCCLHPNDLANEHILASEQALKLFHPELPDEMEREILKQFIKSKY 286
+ N S +P + L +HI A K H P ++ EI+ +
Sbjct: 94 ILLDEN--SRRRNPQFKSIALRSLRYDHIDHRALARKSPHLMPPTYIKEEIM----DDEL 147
Query: 285 DDLRELNDAANETAIATA-VNVYVEKMEK 202
D+++E + E A+ TA V + ++ EK
Sbjct: 148 DEVKEEEVSVGEAALPTAKVELNMDHPEK 176
>U88167-1|AAB42226.1| 319|Caenorhabditis elegans Hypothetical
protein D2092.6 protein.
Length = 319
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -2
Query: 669 PPLDDNEYEAKYQESYRKAIETFDQRRNRPTEFP 568
PP+ + +Y +YRK E F RR++ E P
Sbjct: 65 PPIPERDYSRLRPLAYRKRGEEFPMRRSKSYERP 98
>CU457740-4|CAM36334.1| 735|Caenorhabditis elegans Hypothetical
protein C50E10.4 protein.
Length = 735
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -2
Query: 246 AIATAVNVYVEKMEKATEFKGWWIPTLGIPYLVNLANRSSYHEEA---KEAALLNFYSNR 76
A+ + +++ K EKA + + PT I ++N A HE+ ++ L +Y NR
Sbjct: 86 AVRLSADIFAHKFEKAVCSRQTFEPTNSIIKVLNTAEEEMLHEKVVPLPVSSKLQYYLNR 145
>AC006693-7|AAF60385.1| 201|Caenorhabditis elegans Hypothetical
protein W02H5.2 protein.
Length = 201
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = -2
Query: 426 PDTCCLHPNDLANEHILASEQALKL--FHPELPDEMEREILKQFIKSKYDDLRELNDAAN 253
P TC ++ N+LA HI+ + A KL F+ +L + +E + ++ L+EL + N
Sbjct: 124 PHTCAINKNELA--HIVKFDLAQKLHEFYGQLDESLEDR------EESHEILQELQELGN 175
Query: 252 E 250
E
Sbjct: 176 E 176
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,119,129
Number of Sequences: 27780
Number of extensions: 307529
Number of successful extensions: 988
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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