Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_D09
         (618 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U47025-1|AAB60395.1|  843|Homo sapiens glycogen phosphorylase B ...    29   9.9  
J03544-1|AAA59597.1|  863|Homo sapiens PYGB protein.                   29   9.9  
BC030795-1|AAH30795.1|  843|Homo sapiens phosphorylase, glycogen...    29   9.9  
BC017045-1|AAH17045.1|  843|Homo sapiens phosphorylase, glycogen...    29   9.9  
AL121772-2|CAI23473.1|  244|Homo sapiens phosphorylase, glycogen...    29   9.9  
AL121772-1|CAC00661.1|  843|Homo sapiens phosphorylase, glycogen...    29   9.9  
AB209080-1|BAD92317.1|  865|Homo sapiens brain glycogen phosphor...    29   9.9  

>U47025-1|AAB60395.1|  843|Homo sapiens glycogen phosphorylase B
           protein.
          Length = 843

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -3

Query: 616 VXDTVNHGSVIGEAMNQ-FLNNNAAEIIEEMRPAASAS 506
           + D VNH  V+G+ +   FL N    + E++ PAA  S
Sbjct: 627 IGDVVNHDPVVGDRLKVIFLENYRVSLAEKVIPAADLS 664


>J03544-1|AAA59597.1|  863|Homo sapiens PYGB protein.
          Length = 863

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -3

Query: 616 VXDTVNHGSVIGEAMNQ-FLNNNAAEIIEEMRPAASAS 506
           + D VNH  V+G+ +   FL N    + E++ PAA  S
Sbjct: 627 IGDVVNHDPVVGDRLKVIFLENYRVSLAEKVIPAADLS 664


>BC030795-1|AAH30795.1|  843|Homo sapiens phosphorylase, glycogen;
           brain protein.
          Length = 843

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -3

Query: 616 VXDTVNHGSVIGEAMNQ-FLNNNAAEIIEEMRPAASAS 506
           + D VNH  V+G+ +   FL N    + E++ PAA  S
Sbjct: 627 IGDVVNHDPVVGDRLKVIFLENYRVSLAEKVIPAADLS 664


>BC017045-1|AAH17045.1|  843|Homo sapiens phosphorylase, glycogen;
           brain protein.
          Length = 843

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -3

Query: 616 VXDTVNHGSVIGEAMNQ-FLNNNAAEIIEEMRPAASAS 506
           + D VNH  V+G+ +   FL N    + E++ PAA  S
Sbjct: 627 IGDVVNHDPVVGDRLKVIFLENYRVSLAEKVIPAADLS 664


>AL121772-2|CAI23473.1|  244|Homo sapiens phosphorylase, glycogen;
           brain protein.
          Length = 244

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -3

Query: 616 VXDTVNHGSVIGEAMNQ-FLNNNAAEIIEEMRPAASAS 506
           + D VNH  V+G+ +   FL N    + E++ PAA  S
Sbjct: 45  IGDVVNHDPVVGDRLKVIFLENYRVSLAEKVIPAADLS 82


>AL121772-1|CAC00661.1|  843|Homo sapiens phosphorylase, glycogen;
           brain protein.
          Length = 843

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -3

Query: 616 VXDTVNHGSVIGEAMNQ-FLNNNAAEIIEEMRPAASAS 506
           + D VNH  V+G+ +   FL N    + E++ PAA  S
Sbjct: 627 IGDVVNHDPVVGDRLKVIFLENYRVSLAEKVIPAADLS 664


>AB209080-1|BAD92317.1|  865|Homo sapiens brain glycogen
           phosphorylase variant protein.
          Length = 865

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -3

Query: 616 VXDTVNHGSVIGEAMNQ-FLNNNAAEIIEEMRPAASAS 506
           + D VNH  V+G+ +   FL N    + E++ PAA  S
Sbjct: 649 IGDVVNHDPVVGDRLKVIFLENYRVSLAEKVIPAADLS 686


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,858,774
Number of Sequences: 237096
Number of extensions: 1176185
Number of successful extensions: 1974
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1974
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)