Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_D08
(458 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28424-1|AAC50502.1| 504|Homo sapiens p58 protein. 31 2.5
BC047936-1|AAH47936.2| 504|Homo sapiens DnaJ (Hsp40) homolog, s... 31 2.5
AY795482-1|AAV40838.1| 504|Homo sapiens DnaJ (Hsp40) homolog, s... 31 2.5
AL138955-1|CAH70090.1| 504|Homo sapiens DnaJ (Hsp40) homolog, s... 31 2.5
X64838-1|CAA46050.1| 1427|Homo sapiens restin protein. 29 5.8
M97501-1|AAA35693.1| 1392|Homo sapiens cytoplasmic linker protei... 29 5.8
BC126305-1|AAI26306.1| 1438|Homo sapiens CLIP1 protein protein. 29 5.8
BC117209-1|AAI17210.1| 1438|Homo sapiens CLIP1 protein protein. 29 5.8
BC114213-1|AAI14214.1| 1392|Homo sapiens CAP-GLY domain containi... 29 5.8
AB209115-1|BAD92352.1| 1065|Homo sapiens restin isoform a varian... 29 5.8
BC033900-1|AAH33900.1| 335|Homo sapiens NDE1 protein protein. 29 7.7
BC001421-1|AAH01421.1| 335|Homo sapiens nudE nuclear distributi... 29 7.7
AK000108-1|BAA90949.1| 335|Homo sapiens protein ( Homo sapiens ... 29 7.7
>U28424-1|AAC50502.1| 504|Homo sapiens p58 protein.
Length = 504
Score = 30.7 bits (66), Expect = 2.5
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Frame = -3
Query: 297 DNVNLDEVLSNSRLLQP-YIKCILDTDRCAPDAKELKEHIREALETECAKCTEAQKKGTR 121
DNVN + + + L++ Y + I D + A + E + IRE LE ++QK+
Sbjct: 338 DNVNALKDRAEAYLIEEMYDEAIQDYET-AQEHNENDQQIREGLEKAQRLLKQSQKRDYY 396
Query: 120 RVIGHLINNESE----SWNELTAKYDPENKFTAKYEKELREXK 4
+++G N + + ++ +L ++ P+N F + EK+ E K
Sbjct: 397 KILGVKRNAKKQEIIKAYRKLALQWHPDN-FQNEEEKKKAEKK 438
>BC047936-1|AAH47936.2| 504|Homo sapiens DnaJ (Hsp40) homolog,
subfamily C, member 3 protein.
Length = 504
Score = 30.7 bits (66), Expect = 2.5
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Frame = -3
Query: 297 DNVNLDEVLSNSRLLQP-YIKCILDTDRCAPDAKELKEHIREALETECAKCTEAQKKGTR 121
DNVN + + + L++ Y + I D + A + E + IRE LE ++QK+
Sbjct: 338 DNVNALKDRAEAYLIEEMYDEAIQDYET-AQEHNENDQQIREGLEKAQRLLKQSQKRDYY 396
Query: 120 RVIGHLINNESE----SWNELTAKYDPENKFTAKYEKELREXK 4
+++G N + + ++ +L ++ P+N F + EK+ E K
Sbjct: 397 KILGVKRNAKKQEIIKAYRKLALQWHPDN-FQNEEEKKKAEKK 438
>AY795482-1|AAV40838.1| 504|Homo sapiens DnaJ (Hsp40) homolog,
subfamily C, member 3 protein.
Length = 504
Score = 30.7 bits (66), Expect = 2.5
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Frame = -3
Query: 297 DNVNLDEVLSNSRLLQP-YIKCILDTDRCAPDAKELKEHIREALETECAKCTEAQKKGTR 121
DNVN + + + L++ Y + I D + A + E + IRE LE ++QK+
Sbjct: 338 DNVNALKDRAEAYLIEEMYDEAIQDYET-AQEHNENDQQIREGLEKAQRLLKQSQKRDYY 396
Query: 120 RVIGHLINNESE----SWNELTAKYDPENKFTAKYEKELREXK 4
+++G N + + ++ +L ++ P+N F + EK+ E K
Sbjct: 397 KILGVKRNAKKQEIIKAYRKLALQWHPDN-FQNEEEKKKAEKK 438
>AL138955-1|CAH70090.1| 504|Homo sapiens DnaJ (Hsp40) homolog,
subfamily C, member 3 protein.
Length = 504
Score = 30.7 bits (66), Expect = 2.5
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Frame = -3
Query: 297 DNVNLDEVLSNSRLLQP-YIKCILDTDRCAPDAKELKEHIREALETECAKCTEAQKKGTR 121
DNVN + + + L++ Y + I D + A + E + IRE LE ++QK+
Sbjct: 338 DNVNALKDRAEAYLIEEMYDEAIQDYET-AQEHNENDQQIREGLEKAQRLLKQSQKRDYY 396
Query: 120 RVIGHLINNESE----SWNELTAKYDPENKFTAKYEKELREXK 4
+++G N + + ++ +L ++ P+N F + EK+ E K
Sbjct: 397 KILGVKRNAKKQEIIKAYRKLALQWHPDN-FQNEEEKKKAEKK 438
>X64838-1|CAA46050.1| 1427|Homo sapiens restin protein.
Length = 1427
Score = 29.5 bits (63), Expect = 5.8
Identities = 21/100 (21%), Positives = 40/100 (40%)
Frame = -3
Query: 303 RYDNVNLDEVLSNSRLLQPYIKCILDTDRCAPDAKELKEHIREALETECAKCTEAQKKGT 124
RY+ + + +LQ K +LDT+ A+E + + LE + +A+ T
Sbjct: 1017 RYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQT 1076
Query: 123 RRVIGHLINNESESWNELTAKYDPENKFTAKYEKELREXK 4
++ ++ E A + + AK + EL K
Sbjct: 1077 AEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLK 1116
>M97501-1|AAA35693.1| 1392|Homo sapiens cytoplasmic linker protein-170
alpha-2 protein.
Length = 1392
Score = 29.5 bits (63), Expect = 5.8
Identities = 21/100 (21%), Positives = 40/100 (40%)
Frame = -3
Query: 303 RYDNVNLDEVLSNSRLLQPYIKCILDTDRCAPDAKELKEHIREALETECAKCTEAQKKGT 124
RY+ + + +LQ K +LDT+ A+E + + LE + +A+ T
Sbjct: 982 RYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQAEKAKAAQT 1041
Query: 123 RRVIGHLINNESESWNELTAKYDPENKFTAKYEKELREXK 4
++ ++ E A + + AK + EL K
Sbjct: 1042 AEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLK 1081
>BC126305-1|AAI26306.1| 1438|Homo sapiens CLIP1 protein protein.
Length = 1438
Score = 29.5 bits (63), Expect = 5.8
Identities = 21/100 (21%), Positives = 40/100 (40%)
Frame = -3
Query: 303 RYDNVNLDEVLSNSRLLQPYIKCILDTDRCAPDAKELKEHIREALETECAKCTEAQKKGT 124
RY+ + + +LQ K +LDT+ A+E + + LE + +A+ T
Sbjct: 1028 RYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQT 1087
Query: 123 RRVIGHLINNESESWNELTAKYDPENKFTAKYEKELREXK 4
++ ++ E A + + AK + EL K
Sbjct: 1088 AEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLK 1127
>BC117209-1|AAI17210.1| 1438|Homo sapiens CLIP1 protein protein.
Length = 1438
Score = 29.5 bits (63), Expect = 5.8
Identities = 21/100 (21%), Positives = 40/100 (40%)
Frame = -3
Query: 303 RYDNVNLDEVLSNSRLLQPYIKCILDTDRCAPDAKELKEHIREALETECAKCTEAQKKGT 124
RY+ + + +LQ K +LDT+ A+E + + LE + +A+ T
Sbjct: 1028 RYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQAEKAKAAQT 1087
Query: 123 RRVIGHLINNESESWNELTAKYDPENKFTAKYEKELREXK 4
++ ++ E A + + AK + EL K
Sbjct: 1088 AEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLK 1127
>BC114213-1|AAI14214.1| 1392|Homo sapiens CAP-GLY domain containing
linker protein 1 protein.
Length = 1392
Score = 29.5 bits (63), Expect = 5.8
Identities = 21/100 (21%), Positives = 40/100 (40%)
Frame = -3
Query: 303 RYDNVNLDEVLSNSRLLQPYIKCILDTDRCAPDAKELKEHIREALETECAKCTEAQKKGT 124
RY+ + + +LQ K +LDT+ A+E + + LE + +A+ T
Sbjct: 982 RYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQT 1041
Query: 123 RRVIGHLINNESESWNELTAKYDPENKFTAKYEKELREXK 4
++ ++ E A + + AK + EL K
Sbjct: 1042 AEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLK 1081
>AB209115-1|BAD92352.1| 1065|Homo sapiens restin isoform a variant
protein.
Length = 1065
Score = 29.5 bits (63), Expect = 5.8
Identities = 21/100 (21%), Positives = 40/100 (40%)
Frame = -3
Query: 303 RYDNVNLDEVLSNSRLLQPYIKCILDTDRCAPDAKELKEHIREALETECAKCTEAQKKGT 124
RY+ + + +LQ K +LDT+ A+E + + LE + +A+ T
Sbjct: 653 RYERATSETKTKHEEILQNLQKTLLDTEDKLKGAREENSGLLQELEELRKQAEKAKAAQT 712
Query: 123 RRVIGHLINNESESWNELTAKYDPENKFTAKYEKELREXK 4
++ ++ E A + + AK + EL K
Sbjct: 713 AEDAMQIMEQMTKEKTETLASLEDTKQTNAKLQNELDTLK 752
>BC033900-1|AAH33900.1| 335|Homo sapiens NDE1 protein protein.
Length = 335
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 251 SLTLNVSSTRTGVPLTLRS*RNTSGRHSRPNARNVP 144
+L + S RTG P + RS +N G RP++ +VP
Sbjct: 276 NLVYDQSPNRTGGPASGRSSKNRDGGERRPSSTSVP 311
>BC001421-1|AAH01421.1| 335|Homo sapiens nudE nuclear distribution
gene E homolog 1 (A. nidulans) protein.
Length = 335
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 251 SLTLNVSSTRTGVPLTLRS*RNTSGRHSRPNARNVP 144
+L + S RTG P + RS +N G RP++ +VP
Sbjct: 276 NLVYDQSPNRTGGPASGRSSKNRDGGERRPSSTSVP 311
>AK000108-1|BAA90949.1| 335|Homo sapiens protein ( Homo sapiens
cDNA FLJ20101 fis, clone COL04655. ).
Length = 335
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -1
Query: 251 SLTLNVSSTRTGVPLTLRS*RNTSGRHSRPNARNVP 144
+L + S RTG P + RS +N G RP++ +VP
Sbjct: 276 NLVYDQSPNRTGGPASGRSSKNRDGGERRPSSTSVP 311
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,775,687
Number of Sequences: 237096
Number of extensions: 1201945
Number of successful extensions: 2853
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2851
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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