Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_D08
(458 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical ... 29 2.1
Z66515-10|CAI70410.1| 510|Caenorhabditis elegans Hypothetical p... 28 3.8
Z66515-9|CAA91346.1| 519|Caenorhabditis elegans Hypothetical pr... 28 3.8
AF077536-5|ABO16441.1| 278|Caenorhabditis elegans Hypothetical ... 28 3.8
Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical pr... 27 5.0
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 27 5.0
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 27 5.0
Z99280-6|CAB16502.1| 418|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z82284-9|CAB05295.1| 418|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z71258-14|CAN86574.1| 201|Caenorhabditis elegans Hypothetical p... 27 6.6
U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of ... 27 6.6
AC084154-4|AAK29868.1| 767|Caenorhabditis elegans Hypothetical ... 27 6.6
Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical pr... 27 8.7
>AL032632-9|CAA21588.2| 1464|Caenorhabditis elegans Hypothetical
protein Y11D7A.14 protein.
Length = 1464
Score = 28.7 bits (61), Expect = 2.1
Identities = 21/88 (23%), Positives = 42/88 (47%)
Frame = -3
Query: 273 LSNSRLLQPYIKCILDTDRCAPDAKELKEHIREALETECAKCTEAQKKGTRRVIGHLINN 94
+ N L+ +K + DR + ++++ + E + K E +++ R+ + + N
Sbjct: 849 IKNEEALKENLKLSMLLDREKSEKVKVQKELEEVEKQGREKLLEKERE-FRKTMEEMEQN 907
Query: 93 ESESWNELTAKYDPENKFTAKYEKELRE 10
E E +N L KY+ ++K K LRE
Sbjct: 908 E-EIFNVLERKYNEQHKKVMKMNDVLRE 934
>Z66515-10|CAI70410.1| 510|Caenorhabditis elegans Hypothetical
protein R53.1b protein.
Length = 510
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 210 PDAKELKEHIREALETECAKCTEAQKKGTRRVI-GHLINNESESWNELTAKY 58
P+ K + +ETE ++ EA R ++ GH++ +S +W ++ K+
Sbjct: 231 PELKNKFFKTKLTIETESSETMEAVVTSLRELLAGHIVYYDSHAWLDIVTKW 282
>Z66515-9|CAA91346.1| 519|Caenorhabditis elegans Hypothetical
protein R53.1a protein.
Length = 519
Score = 27.9 bits (59), Expect = 3.8
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 210 PDAKELKEHIREALETECAKCTEAQKKGTRRVI-GHLINNESESWNELTAKY 58
P+ K + +ETE ++ EA R ++ GH++ +S +W ++ K+
Sbjct: 240 PELKNKFFKTKLTIETESSETMEAVVTSLRELLAGHIVYYDSHAWLDIVTKW 291
>AF077536-5|ABO16441.1| 278|Caenorhabditis elegans Hypothetical
protein C16A11.9 protein.
Length = 278
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/66 (22%), Positives = 31/66 (46%)
Frame = -3
Query: 201 KELKEHIREALETECAKCTEAQKKGTRRVIGHLINNESESWNELTAKYDPENKFTAKYEK 22
K L+ + R L +C+ + +K + + N + S+N + K +NKF A +
Sbjct: 16 KHLEANKRFQLVAQCSSLVKVEKSQPLVIKKLIFNRRTISFNGVKYKLGAKNKFEAPHTL 75
Query: 21 ELREXK 4
+++ K
Sbjct: 76 AIKQLK 81
>Z74035-3|CAA98481.1| 808|Caenorhabditis elegans Hypothetical
protein F47G9.4 protein.
Length = 808
Score = 27.5 bits (58), Expect = 5.0
Identities = 16/73 (21%), Positives = 32/73 (43%)
Frame = -3
Query: 279 EVLSNSRLLQPYIKCILDTDRCAPDAKELKEHIREALETECAKCTEAQKKGTRRVIGHLI 100
++L+ ++ L PY+ CIL+ + D K +E+ C + T + R++
Sbjct: 464 QILTAAKQLVPYVSCILNMNAMI-DPKRCHPPDPAPMESICLEITGIEPNSQNRILAIEK 522
Query: 99 NNESESWNELTAK 61
E+ N+ K
Sbjct: 523 EEENRRLNQEAKK 535
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/97 (19%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = -3
Query: 285 LDEVLSNSRLLQP-YIKCILDTDRCAPDAKELKEHIREALET----ECAKCTEAQKKGTR 121
++++L +++ Y+K D D K+L+++ E + +A+K+G +
Sbjct: 1500 INKLLQKLHIIEDSYLKGPKPIDTVREDVKQLEKYRNRGAEILQQLSTSNIEDAEKEGLK 1559
Query: 120 RVIGHLINNESESWNELTAKYDPENKFTAKYEKELRE 10
++NN + + + +N+ TAK ++ L E
Sbjct: 1560 HRFVLMLNNYDDILRSIENEIRDDNELTAKNQEILAE 1596
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 27.5 bits (58), Expect = 5.0
Identities = 19/97 (19%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Frame = -3
Query: 285 LDEVLSNSRLLQP-YIKCILDTDRCAPDAKELKEHIREALET----ECAKCTEAQKKGTR 121
++++L +++ Y+K D D K+L+++ E + +A+K+G +
Sbjct: 1500 INKLLQKLHIIEDSYLKGPKPIDTVREDVKQLEKYRNRGAEILQQLSTSNIEDAEKEGLK 1559
Query: 120 RVIGHLINNESESWNELTAKYDPENKFTAKYEKELRE 10
++NN + + + +N+ TAK ++ L E
Sbjct: 1560 HRFVLMLNNYDDILRSIENEIRDDNELTAKNQEILAE 1596
>Z99280-6|CAB16502.1| 418|Caenorhabditis elegans Hypothetical
protein Y57G11B.1 protein.
Length = 418
Score = 27.1 bits (57), Expect = 6.6
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -3
Query: 201 KELKEHIREALETECAKCTEAQKKGTRRVIGHLINNESESWNELTAKYDPENKFTAKYEK 22
KELKE RE + AK ++ I LIN+ +E+ EL K+D + A Y++
Sbjct: 58 KELKE-AREESDDALAK----RQATADSQISELINSNNEAIRELQKKFDED---AAAYDR 109
Query: 21 ELRE 10
++E
Sbjct: 110 SIKE 113
>Z82284-9|CAB05295.1| 418|Caenorhabditis elegans Hypothetical
protein Y57G11B.1 protein.
Length = 418
Score = 27.1 bits (57), Expect = 6.6
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = -3
Query: 201 KELKEHIREALETECAKCTEAQKKGTRRVIGHLINNESESWNELTAKYDPENKFTAKYEK 22
KELKE RE + AK ++ I LIN+ +E+ EL K+D + A Y++
Sbjct: 58 KELKE-AREESDDALAK----RQATADSQISELINSNNEAIRELQKKFDED---AAAYDR 109
Query: 21 ELRE 10
++E
Sbjct: 110 SIKE 113
>Z71258-14|CAN86574.1| 201|Caenorhabditis elegans Hypothetical
protein C01H6.8a protein.
Length = 201
Score = 27.1 bits (57), Expect = 6.6
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Frame = -3
Query: 258 LLQPYIKCILDTDRCAPDAKELKEHIREALETECAKCTE-AQKKGTRRVIGHLIN----- 97
LL + I TD C+PD K K+H R E E T A+ K V+ +
Sbjct: 5 LLISVVSFISFTDSCSPDVKFEKDHHRRK-ELEDKFITNLAELKNHEEVLLKAVEMMKHA 63
Query: 96 NESESWNELTAKYDPENKFTAKYEKELREXK 4
NE + +E Y K A+ EKEL+ K
Sbjct: 64 NEKKDLDENELDY---KKRIAEIEKELKATK 91
>U41104-5|AAK18976.3| 1564|Caenorhabditis elegans Twik family of
potassium channelsprotein 2 protein.
Length = 1564
Score = 27.1 bits (57), Expect = 6.6
Identities = 10/42 (23%), Positives = 22/42 (52%)
Frame = -3
Query: 240 KCILDTDRCAPDAKELKEHIREALETECAKCTEAQKKGTRRV 115
KC + +CA + +++ + + ++ C KC + KK + V
Sbjct: 1273 KCAKNVQKCAKNVQKMCKKCAKNVQKMCKKCAKMCKKCAKNV 1314
>AC084154-4|AAK29868.1| 767|Caenorhabditis elegans Hypothetical
protein Y22D7AR.7 protein.
Length = 767
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = -3
Query: 138 QKKGTRRVIGHLINNESESWNELTAKYDPEN 46
Q++ T V+ +N E +WN + KY PE+
Sbjct: 544 QERVTHIVMLGQVNEEDANWNRMFCKYFPES 574
>Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical
protein T02E1.3b protein.
Length = 679
Score = 26.6 bits (56), Expect = 8.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3
Query: 324 VWREPRPKRQTGRM 365
+W EP+PK+Q+G M
Sbjct: 487 IWLEPKPKKQSGAM 500
>Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical
protein T02E1.3a protein.
Length = 646
Score = 26.6 bits (56), Expect = 8.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +3
Query: 324 VWREPRPKRQTGRM 365
+W EP+PK+Q+G M
Sbjct: 454 IWLEPKPKKQSGAM 467
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,940,887
Number of Sequences: 27780
Number of extensions: 195534
Number of successful extensions: 558
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -