Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_D07
         (571 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1GGL6 Cluster: Putative uncharacterized protein; n=1; ...    35   1.2  
UniRef50_Q5CVV3 Cluster: Putative uncharacterized protein; n=2; ...    34   2.7  
UniRef50_Q8IK70 Cluster: Putative uncharacterized protein; n=1; ...    32   8.2  

>UniRef50_Q1GGL6 Cluster: Putative uncharacterized protein; n=1;
           Silicibacter sp. TM1040|Rep: Putative uncharacterized
           protein - Silicibacter sp. (strain TM1040)
          Length = 635

 Score = 35.1 bits (77), Expect = 1.2
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +1

Query: 334 TTYVLDMALGVCTSDPGNAGSLSVGFLNKIFFCDPATLL 450
           T Y L + L + +S PG AG L +  L  +   DPATL+
Sbjct: 232 TAYFLALGLAIISSSPGGAGPLELAMLTLLPGADPATLV 270


>UniRef50_Q5CVV3 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium parvum Iowa II
          Length = 428

 Score = 33.9 bits (74), Expect = 2.7
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
 Frame = -3

Query: 176 NLGPHNLNSTSHYLSLLLKFS*IIQLCLIXXXNFK---YLLHSSQLTINVDP 30
           N   HN N    Y+ LLL+ S I  +CL+     K   YL   SQL I ++P
Sbjct: 176 NKHKHNKNEFITYIKLLLRVSFIKSICLLKMYGKKLPIYLFDGSQLLIKIEP 227


>UniRef50_Q8IK70 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 944

 Score = 32.3 bits (70), Expect = 8.2
 Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
 Frame = -3

Query: 548 SKQTCTDYDSERAKSAPNTTD---NVDIRNKQEINVKRVAGSQKKILLRNPT 402
           ++ + +++D+E   ++PNT+D   N DI N    NV+R+  +    ++R  T
Sbjct: 164 TESSLSNHDTENYNASPNTSDDNVNADISNDHSRNVERIQNTYNLFIVRPNT 215


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 522,348,520
Number of Sequences: 1657284
Number of extensions: 9859888
Number of successful extensions: 24237
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24231
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)