Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_D07
(571 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 24 0.79
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 24 0.79
DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like pr... 23 2.4
AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory recept... 23 2.4
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 5.6
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 5.6
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 5.6
AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory recept... 21 7.4
AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase prot... 21 7.4
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 21 7.4
AY873916-1|AAW67572.1| 377|Tribolium castaneum chitinase 6 prot... 21 9.8
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 24.2 bits (50), Expect = 0.79
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -3
Query: 410 NPTDKLPALPGSEVHTPRAMSNTYVVHP 327
+PT +P PG H P S+ +V P
Sbjct: 225 SPTGLIPPHPGLSPHPPHLSSHPAIVTP 252
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 24.2 bits (50), Expect = 0.79
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -3
Query: 410 NPTDKLPALPGSEVHTPRAMSNTYVVHP 327
+PT +P PG H P S+ +V P
Sbjct: 117 SPTGLIPPHPGLSPHPPHLSSHPAIVTP 144
>DQ138190-1|ABA03054.1| 135|Tribolium castaneum bursicon-like
protein protein.
Length = 135
Score = 22.6 bits (46), Expect = 2.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 278 LCLVYATC 255
LCLVYATC
Sbjct: 7 LCLVYATC 14
>AM292355-1|CAL23167.1| 324|Tribolium castaneum gustatory receptor
candidate 34 protein.
Length = 324
Score = 22.6 bits (46), Expect = 2.4
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
Frame = +1
Query: 16 VITLFGSTLIVNCD----ECSKYLKLLLFIKH 99
+I LF TLI+ CD E SK +K ++H
Sbjct: 245 LIFLFNCTLIIMCDCVRSEASKVVKNAQKLRH 276
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.4 bits (43), Expect = 5.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 336 NVRVRHGSRCMHFRP 380
NV V+HG C++ P
Sbjct: 107 NVVVKHGGSCLYVPP 121
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.4 bits (43), Expect = 5.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 336 NVRVRHGSRCMHFRP 380
NV V+HG C++ P
Sbjct: 107 NVVVKHGGSCLYVPP 121
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.4 bits (43), Expect = 5.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 336 NVRVRHGSRCMHFRP 380
NV V+HG C++ P
Sbjct: 107 NVVVKHGGSCLYVPP 121
>AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory receptor
candidate 42 protein.
Length = 347
Score = 21.0 bits (42), Expect = 7.4
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +1
Query: 358 LGVCTSDPGNAGSLSVGFLNKIFFCDPATLLTLISCLFLISTLSVVLGADFARSLS*SVH 537
+GV ++ G A ++VG + I CD A L + + L L + V + +++S ++
Sbjct: 247 IGVVVANVGVAFMINVGTVTLILSCD-AVLEEVKTTLLLAYKIRQVFPNE-KKNISEFIN 304
Query: 538 VCFDN 552
V +N
Sbjct: 305 VVLNN 309
>AJ876407-1|CAI45288.1| 590|Tribolium castaneum phosphatase
protein.
Length = 590
Score = 21.0 bits (42), Expect = 7.4
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 457 ISCLFLISTLSVVLGADFARSL 522
++CLF I+ L+ G+D L
Sbjct: 501 MTCLFCINVLAEACGSDITTRL 522
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 21.0 bits (42), Expect = 7.4
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = -3
Query: 104 QLCLIXXXNFKYLLHSSQLTINVDPNNV 21
QLC I +F Y + + N PN+V
Sbjct: 179 QLCHIEIESFGYTMRDIRYKWNEGPNSV 206
>AY873916-1|AAW67572.1| 377|Tribolium castaneum chitinase 6
protein.
Length = 377
Score = 20.6 bits (41), Expect = 9.8
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +3
Query: 477 IYVIGGVGSGLCTFTVI 527
++ +GG +G TFT +
Sbjct: 96 LFSLGGYAAGTATFTAV 112
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,748
Number of Sequences: 336
Number of extensions: 2801
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -