Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_D07
         (571 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC057852-1|AAH57852.2|  286|Homo sapiens CMTM1 protein protein.        31   2.9  
DQ926079-1|ABI50608.1|  129|Homo sapiens immunoglobulin heavy ch...    31   3.8  

>BC057852-1|AAH57852.2|  286|Homo sapiens CMTM1 protein protein.
          Length = 286

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 19/68 (27%), Positives = 30/68 (44%)
 Frame = -3

Query: 512 AKSAPNTTDNVDIRNKQEINVKRVAGSQKKILLRNPTDKLPALPGSEVHTPRAMSNTYVV 333
           AK+AP     V IR+ Q     R  GS+     R  T + P  P     TP A + + ++
Sbjct: 46  AKTAPRKHPAVSIRSAQSAAAARPQGSEGTAPSRKATTRPPPKPTLPPPTPSAHTESKLL 105

Query: 332 HPAVVKNK 309
           +   +K +
Sbjct: 106 NEMAIKER 113


>DQ926079-1|ABI50608.1|  129|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 129

 Score = 30.7 bits (66), Expect = 3.8
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
 Frame = +3

Query: 252 FTSSIDETK----LMMS*VWLNFFIFYYCGVHNVRVRHGSRCMHFRPW*CGKFV 401
           FT S D +K    L M+ +       YYC   N+    G+RC HF  W  G  V
Sbjct: 67  FTISRDNSKNTLYLQMNSLRAEDTAVYYCAKSNLATCSGARCYHFDYWGQGSLV 120


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,200,503
Number of Sequences: 237096
Number of extensions: 1513014
Number of successful extensions: 6325
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6325
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)