Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_D02
         (779 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0C9F0 Cluster: Chromosome undetermined scaffold_16, wh...    36   1.1  
UniRef50_Q5FIE4 Cluster: Putative uncharacterized protein; n=1; ...    34   4.6  

>UniRef50_A0C9F0 Cluster: Chromosome undetermined scaffold_16, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_16, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 1580

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 15/53 (28%), Positives = 30/53 (56%)
 Frame = -2

Query: 730  HHYYFNVPRRAPVIYMAVNVLIIIGALLTYSIVLCAECPIYDYYTTGSPLISL 572
            ++YY+N+  ++ +I  +VN  +II + +T+ + L + C  Y  Y     +I L
Sbjct: 1172 NYYYYNILSKSSLIDRSVNTFLIIISFMTFILFLASLCYFYQIYHNKLEIIQL 1224


>UniRef50_Q5FIE4 Cluster: Putative uncharacterized protein; n=1;
           Lactobacillus acidophilus|Rep: Putative uncharacterized
           protein - Lactobacillus acidophilus
          Length = 260

 Score = 33.9 bits (74), Expect = 4.6
 Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
 Frame = -1

Query: 347 KF*INFWCNLKTLIFLIIMQ*MCII--KFRFKYKTF------FVFITLICLFFVNLFAGS 192
           +F I  WC+   +IF++IM    I+   +R  Y++       F+F+ ++ +F V LF   
Sbjct: 34  RFSIILWCDFPIVIFILIMGIKLIVSYSYRITYQSISYNSARFIFVIMLVIFIVQLFLLI 93

Query: 191 LFGYSSMDR*VSSLVQPE 138
            +    +   + S+V  E
Sbjct: 94  CYKSFHLQNFIKSIVSSE 111


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,822,311
Number of Sequences: 1657284
Number of extensions: 12396208
Number of successful extensions: 24605
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 23847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24583
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65850543200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)