Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_D02
         (779 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   4.6  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   6.1  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   8.0  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 128  SKFFQVEPVSSPTYPCWNSQIGYQQIGLQKKDIL 229
            S+   V+P      PC +S+ G  ++ L   DIL
Sbjct: 1081 SQIASVQPTGKGVCPCISSEHGENELELTPDDIL 1114


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 668 NNYWGFVDIFYCAMC*VSYL*LLYYR 591
           NN W   D F C +  +SYL L   R
Sbjct: 162 NNMWSVPDGFICPLARLSYLNLTQNR 187


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 248  FFVFITLICLFFVNLFAG 195
            + ++I +I  F VN+F G
Sbjct: 1102 YIIYIIIIAFFMVNIFVG 1119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,426
Number of Sequences: 2352
Number of extensions: 14224
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81497388
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)