Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_D01
(703 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0128 + 995103-995174,996500-996606,996909-997041,997127-99... 61 1e-09
03_05_0177 + 21557762-21559658,21563481-21563623,21564230-21564559 31 1.2
08_02_1023 - 23710825-23710950,23711037-23711120,23711367-237114... 29 3.6
07_01_0929 + 7818973-7820019,7820092-7820328,7820455-7820541,782... 29 3.6
03_02_0438 + 8470290-8470378,8470900-8470990,8471074-8471134,847... 29 3.6
03_01_0418 - 3211687-3211933,3212016-3212164,3212443-3212551,321... 29 3.6
11_06_0236 + 21597601-21598415,21599223-21601152,21601361-21601510 29 4.7
04_03_0713 - 18977806-18978228 29 4.7
03_02_0466 - 8690469-8690522,8691008-8691113,8691216-8691457,869... 28 6.2
12_01_0054 + 463743-464414,464896-465024,465336-465440,465524-46... 28 8.3
11_06_0533 + 24734177-24735787 28 8.3
11_01_0054 + 416626-417297,417757-417885,418197-418301,418385-41... 28 8.3
09_06_0146 + 21186889-21187178,21187321-21187435,21188595-211886... 28 8.3
07_03_0685 - 20679883-20679927,20680034-20680087,20680179-206803... 28 8.3
05_04_0228 - 19224901-19224991,19225095-19225219,19225293-192254... 28 8.3
>03_01_0128 + 995103-995174,996500-996606,996909-997041,997127-997270,
997589-997747,997865-997938,998024-998099,998476-998531,
998651-998738,998824-998964,999057-999206,999320-999476,
1001183-1001773,1002673-1003532
Length = 935
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/101 (27%), Positives = 57/101 (56%)
Frame = -2
Query: 429 GFKARLVRTLANLCWKNQENKKQMRDLDVIPVLLDCCNIDARNPLIMQWVIFAIRTLCEN 250
G++ +V +AN ++++ + ++R LD I +LL C +D NP + +W +FA++ L E
Sbjct: 833 GYRRDVVAVIANCLHRSKKVQDEVRHLDGIILLLQQCVVDEENPYLREWGLFAVKNLLEG 892
Query: 249 CPENQEVIAKTTLQGPVDNEVLQEMGLTLYTDSQNNSIKIM 127
ENQ+ ++ +Q V + ++GL + D + K++
Sbjct: 893 NEENQKEVSGLKMQEAVITPEIADIGLRVEIDKETGHPKLV 933
>03_05_0177 + 21557762-21559658,21563481-21563623,21564230-21564559
Length = 789
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = -2
Query: 684 DFDLSEQLQKILGISSEKTRGESNAEKKSEPVKEVKISEE-NVATKVPSVKIDSPETQKT 508
D D +L K LG+ T + K+ E + VK++ N+ K P V + +K
Sbjct: 614 DRDGGAELIKSLGLPDRATESINRLMKRREHIDAVKVARAFNLIDKFPPVSVIKAYVEKV 673
Query: 507 RLGAVDM 487
+ A DM
Sbjct: 674 KEAAQDM 680
>08_02_1023 -
23710825-23710950,23711037-23711120,23711367-23711492,
23711593-23711712,23712046-23712153,23712243-23712395,
23712505-23712600,23712716-23712800,23713278-23714268,
23714870-23714915,23715806-23715964,23716516-23716651,
23716734-23716900,23717366-23717696,23717827-23718062,
23718326-23718514
Length = 1050
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -1
Query: 514 KDKAWRSRHDHTEEDGNLRGDGRETRRVWFQSAPGQDLGEFVLEES 377
KD S D EEDG + ++ WF S G VLE+S
Sbjct: 717 KDDVVSSDSDEEEEDGEENSGASQKKKGWFSSMFKSIAGNNVLEKS 762
>07_01_0929 +
7818973-7820019,7820092-7820328,7820455-7820541,
7820785-7820919
Length = 501
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -2
Query: 642 SSEKTRGESNAEKKSEPVKEVKISEENVATKVPSVKIDSPETQ 514
S E + GES EK E +E + ++ AT P DSPET+
Sbjct: 414 SPEPSEGESADEKNPEEEEEEE-GDDAAATTTPGGDGDSPETE 455
>03_02_0438 +
8470290-8470378,8470900-8470990,8471074-8471134,
8471678-8471755,8471891-8471964,8472689-8472802,
8472881-8472988,8473937-8473975,8474046-8474132
Length = 246
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = -1
Query: 511 DKAWRSRHDH---TEEDGNLRGDGRETRRVW 428
DK WR R +EE+G L+ D ET+ +W
Sbjct: 158 DKEWRRRKMQMRISEEEGRLKKDEEETKEMW 188
>03_01_0418 -
3211687-3211933,3212016-3212164,3212443-3212551,
3212650-3212840,3212967-3213102,3213216-3213716,
3213819-3213923,3214008-3214095,3214195-3214266,
3214692-3214762,3215726-3216008,3216388-3216463
Length = 675
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -2
Query: 618 SNAEKKSEPVKEVKISEENVATKVPSVKIDSPETQKTRLGAV 493
S KS K +K +++N + S+ SP+TQ+ RLG++
Sbjct: 80 SKERNKSREKKSMKGTKKNKQIRGRSISAPSPKTQEKRLGSL 121
>11_06_0236 + 21597601-21598415,21599223-21601152,21601361-21601510
Length = 964
Score = 28.7 bits (61), Expect = 4.7
Identities = 22/80 (27%), Positives = 35/80 (43%)
Frame = -2
Query: 357 RDLDVIPVLLDCCNIDARNPLIMQWVIFAIRTLCENCPENQEVIAKTTLQGPVDNEVLQE 178
RDLDV+ + + C++ W + A L N + IA T LQG + V E
Sbjct: 790 RDLDVLARMPELCSLRLDITRRFPWTVVAGDGLFPNLRYCRMDIALTFLQGAMPMLVKVE 849
Query: 177 MGLTLYTDSQNNSIKIMPLP 118
+ + + D N + + LP
Sbjct: 850 LYVWVARDDAANDVGLGNLP 869
>04_03_0713 - 18977806-18978228
Length = 140
Score = 28.7 bits (61), Expect = 4.7
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +1
Query: 388 AQIRQGPDQARFETKRDVSLDRLHAS--YRLLRCGHV--DCAKPCLLCFRRINFHGRYFS 555
A R+G + +FET + L +S YRL G + D +PC++ F +FH Y
Sbjct: 38 AAARRGMMRVQFETDSLTLVQGLKSSNGYRLAATGGLCLDILQPCVISFNVFSFH--YCP 95
Query: 556 RN 561
RN
Sbjct: 96 RN 97
>03_02_0466 -
8690469-8690522,8691008-8691113,8691216-8691457,
8691477-8691546,8692224-8692499,8693058-8693137,
8693408-8693489,8693566-8693663,8693868-8693936,
8694015-8694113,8694681-8694737,8694874-8695039,
8695152-8695196,8695286-8695347,8695425-8695532,
8695719-8695769,8695843-8695944,8696362-8696448,
8696560-8696823,8696977-8697189,8697337-8697398,
8697517-8697849,8697943-8698138
Length = 973
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 290 CNGSYSPSARCVKTVRKIRKLSQRLHSKVQSTMKY 186
CN Y+P+ R ++ V K+ Q S+V + +KY
Sbjct: 477 CNDLYAPALRQLRQVAKVHMFVQPTISRVVNRLKY 511
>12_01_0054 +
463743-464414,464896-465024,465336-465440,465524-465917,
466325-466422,466505-466753,466920-466979
Length = 568
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 239 FSGQFSHNVRMANMTHCII 295
F QFSHN+R N+++C +
Sbjct: 456 FLSQFSHNLRQINLSYCSV 474
>11_06_0533 + 24734177-24735787
Length = 536
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = -2
Query: 672 SEQLQKILGISSEKTRGESNAEKKSEPVKEVKISEENVATKVPSVKIDSPETQKTR 505
SE +I SE ++ AEK V E+ KV ++I+ ET KT+
Sbjct: 301 SELESEIDSSKSELAAAKTEAEKLRSEVAEIDEKHRMAEAKVNELQIEIEETMKTK 356
>11_01_0054 +
416626-417297,417757-417885,418197-418301,418385-418778,
419186-419283,419366-419614,419784-419843
Length = 568
Score = 27.9 bits (59), Expect = 8.3
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 239 FSGQFSHNVRMANMTHCII 295
F QFSHN+R N+++C +
Sbjct: 456 FLSQFSHNLRQINLSYCSV 474
>09_06_0146 +
21186889-21187178,21187321-21187435,21188595-21188686,
21188839-21188952,21189139-21189193,21189348-21189458,
21190226-21190279,21190362-21190537,21190623-21190730,
21191332-21191405,21191500-21191675,21192169-21192264,
21192534-21192614,21192713-21192766,21193246-21193380,
21193453-21193533
Length = 603
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = -2
Query: 678 DLSEQLQKILGISSEKTRGESNAEKKSEPVKEVKISEENVATKV 547
DL E ++K +G ++T+G S S PV+ ++I E + A V
Sbjct: 263 DLIESVRKEIG-KIDETQGWSTTHSWSSPVENMQIGENSAADHV 305
>07_03_0685 -
20679883-20679927,20680034-20680087,20680179-20680390,
20680476-20680550,20683094-20683168,20686196-20686264,
20686349-20686502,20686577-20686654,20689102-20689194,
20689491-20689640,20690134-20690268,20691009-20691098,
20691412-20691453,20691796-20692053,20692131-20692207,
20693126-20693186,20693687-20693905,20694936-20695208,
20695314-20695505,20695841-20696011
Length = 840
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 402 LANLCWKNQENKKQMRDLDVIPV 334
L LCWK+ E K+Q ++ +PV
Sbjct: 630 LVTLCWKSDEEKEQSTEIIRLPV 652
>05_04_0228 -
19224901-19224991,19225095-19225219,19225293-19225410,
19225554-19225618,19225760-19225839,19225942-19226005,
19227341-19227480,19227571-19227694,19227781-19227840,
19227922-19227990,19228139-19228288,19229182-19229289,
19229573-19229648,19229960-19230054,19231729-19231803,
19231923-19232043,19232136-19232308,19232647-19232813,
19232944-19233301
Length = 752
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 402 LANLCWKNQENKKQMRDLDVIPVLL 328
L L +KN ENK Q+ D + +P L+
Sbjct: 260 LRTLAFKNDENKSQIVDCNALPTLI 284
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,377,569
Number of Sequences: 37544
Number of extensions: 364311
Number of successful extensions: 1023
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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