Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_D01
(703 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 35 0.065
L10986-8|AAA28013.2| 286|Caenorhabditis elegans Hypothetical pr... 34 0.086
U88173-10|AAK21389.3| 390|Caenorhabditis elegans Hypothetical p... 33 0.15
U41535-13|AAB63405.1| 1075|Caenorhabditis elegans Hypothetical p... 30 1.8
L14433-3|AAA27977.1| 2329|Caenorhabditis elegans Yeast prp (spli... 29 2.4
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 29 3.2
U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z74475-2|CAA98958.4| 385|Caenorhabditis elegans Hypothetical pr... 29 4.3
U97011-2|AAB52325.2| 689|Caenorhabditis elegans Hypothetical pr... 28 5.6
U41995-8|AAN84829.1| 350|Caenorhabditis elegans Hypothetical pr... 28 7.4
AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical ... 28 7.4
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 27 9.8
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 34.7 bits (76), Expect = 0.065
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Frame = -2
Query: 642 SSEKTRGESNAEKKSE-PVKEVKISEENVAT-KVPSVKI-DSPETQKT 508
SS G++N EKK+E PV E K+SEE T + P+ ++ +S + +KT
Sbjct: 41 SSTHENGDTNIEKKTEEPVVEAKVSEEPATTSETPAAQVTESQKDEKT 88
>L10986-8|AAA28013.2| 286|Caenorhabditis elegans Hypothetical
protein F10E9.2 protein.
Length = 286
Score = 34.3 bits (75), Expect = 0.086
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -2
Query: 702 SQNLXTDFDLSEQLQKILGISSEKT--RGESNAEKKSEPVKEVKISEENVATKVPSVKID 529
S+ +D ++ +L + +K GE EKKS KE KIS ENV + PS + +
Sbjct: 223 SKTRLSDLKITRHKMLLLDVDDQKKDGSGEEKKEKKSAE-KEKKISHENVQSLSPSSRAE 281
Query: 528 SPET 517
P +
Sbjct: 282 DPRS 285
>U88173-10|AAK21389.3| 390|Caenorhabditis elegans Hypothetical
protein F46F11.10 protein.
Length = 390
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = -2
Query: 621 ESNAEKKSEPVKEVKISEENVATKVPSVKIDSPET 517
E +A KK E V KISE+NV ++VPS + P +
Sbjct: 111 EEDARKKLEKVNFRKISEQNVGSRVPSYMLHFPNS 145
>U41535-13|AAB63405.1| 1075|Caenorhabditis elegans Hypothetical
protein F18A1.1 protein.
Length = 1075
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -2
Query: 423 KARLVRTLANLCWKNQENKKQMRDLDVIPVLLDCCNID 310
K R++RT LCW+ Q+ +K ++ + + DC NI+
Sbjct: 697 KIRMIRT-PQLCWEVQKLRKVVQAFKMKHIYSDCANIE 733
>L14433-3|AAA27977.1| 2329|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 8 protein.
Length = 2329
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = -2
Query: 303 NPLIMQWVIFAIRTLCENCPENQEVIAKTTLQGPVDNEVLQEMGLTLYTDSQNNSIKIMP 124
+PLI V+ ++ EN PE +E + + P D + E + LYTD+ N + ++
Sbjct: 343 DPLINPIVLSNLKATEENLPEGEE---EDEWELPEDVRPIFE-DVPLYTDNTANGLALLW 398
Query: 123 LPRP 112
PRP
Sbjct: 399 APRP 402
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 636 EKTRGESNAEKKSEPVKEVKISEENVATKVPSVKIDSPETQKT 508
E+T GE K SEP ++ E++ T S+ +D Q T
Sbjct: 1205 ERTTGEQEISKNSEPTEDEMPDEKDHRTSAVSIDLDKVFVQGT 1247
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 636 EKTRGESNAEKKSEPVKEVKISEENVATKVPSVKIDSPETQKT 508
E+T GE K SEP ++ E+ T S+ +D Q T
Sbjct: 1892 ERTTGEQEILKNSEPAEDETSDEKKHRTAAVSIDLDKVFVQGT 1934
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 636 EKTRGESNAEKKSEPVKEVKISEENVATKVPSVKIDSPETQKT 508
E+T GE K SEP ++ E++ T S+ +D Q T
Sbjct: 1205 ERTTGEQEISKNSEPTEDEMPDEKDHRTSAVSIDLDKVFVQGT 1247
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = -2
Query: 636 EKTRGESNAEKKSEPVKEVKISEENVATKVPSVKIDSPETQKT 508
E+T GE K SEP ++ E+ T S+ +D Q T
Sbjct: 1892 ERTTGEQEILKNSEPAEDETSDEKKHRTAAVSIDLDKVFVQGT 1934
>U41510-8|AAK39385.1| 493|Caenorhabditis elegans Hypothetical
protein ZC449.5 protein.
Length = 493
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = -2
Query: 678 DLSEQLQKILGISSEKTRGESNAEKKSEPVKEVKISEENVATKVPSVKIDSPETQKTRLG 499
+ SE+ +SE T E ++P K K S+ T S K DS ++ K
Sbjct: 196 EASEEATTTSSETSETTEESEEEETTTKPAKTHKSSKTTTTTTEASTKKDSKKSHKKTKE 255
Query: 498 AVDMTTPK 475
TTP+
Sbjct: 256 EKVTTTPE 263
>Z74475-2|CAA98958.4| 385|Caenorhabditis elegans Hypothetical
protein R04F11.3 protein.
Length = 385
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = -2
Query: 630 TRGESNAEKKSEPVKEVKISEENVATKVPSVKIDSPETQKTRLGAVDMTTPKKT 469
+R +S ++KS P K ++++EN K + DS + ++ + + T KT
Sbjct: 254 SREQSVEKEKSPPAKRKRVNDENKKAKKRLIVPDSDDEEQVPMEVEEKKTETKT 307
>U97011-2|AAB52325.2| 689|Caenorhabditis elegans Hypothetical
protein F31F7.2 protein.
Length = 689
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1
Query: 490 HDHTEEDGNLRGDGRETRR 434
HDH+E G RG G+E RR
Sbjct: 386 HDHSEHTGKERGRGKEHRR 404
>U41995-8|AAN84829.1| 350|Caenorhabditis elegans Hypothetical
protein E02C12.8a protein.
Length = 350
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 488 MSTAPSLVFCVSGESIFTEGTLVATFSSEIFTSLTGSLFFSAFDSPLVFSDEIPN 652
+ TA L+ C+SG+ GT + E +TS+ G F+ F +F+ + N
Sbjct: 293 LDTARLLLGCLSGQERRERGTELLKVYHETYTSVFGEELFT-FQEVYIFNSFVKN 346
>AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical
protein F49H12.5 protein.
Length = 257
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 648 GISSEKTRGESNAEKKSEPVKEVKISEENVATK 550
G E +GE +EKK E +E K E+ V K
Sbjct: 157 GTDEEPAKGEVKSEKKEEKKEEAKKEEKKVEKK 189
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -2
Query: 684 DFDLSEQLQKILGISSEKTRGESNAEKKSEPVKEVKISEENVA--TKVPSVKIDSPETQK 511
DF + ++L + + + E+ + +SN +K + P + +A KV +DSP ++
Sbjct: 402 DFSVDDELMERMAKAGEQRKVQSNLKKLAVPETVEREVSTPIAYHVKVHDDDVDSPVIEQ 461
Query: 510 TRLGAVDMTTPK 475
+ + +PK
Sbjct: 462 PPIASESFESPK 473
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,464,528
Number of Sequences: 27780
Number of extensions: 337571
Number of successful extensions: 1192
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1131
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1192
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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