Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_D01
         (703 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    25   0.92 
DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein ...    24   1.6  
AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein ...    24   1.6  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    23   2.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   6.5  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   8.6  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   8.6  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 24.6 bits (51), Expect = 0.92
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 425 SKRAWSGPWRICAGRIRRIKNRC 357
           SK  +SG WR+C     R++  C
Sbjct: 96  SKVTYSGLWRVCVAISSRMEYEC 118


>DQ855485-1|ABH88172.1|  128|Apis mellifera chemosensory protein 4
           protein.
          Length = 128

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 273 AIRTLCENCPENQEVIAKTTLQGPVDNE 190
           A+   C  C E Q+ IA   +Q  +DN+
Sbjct: 70  ALENECSPCSEKQKKIADKVVQFLIDNK 97


>AJ973400-1|CAJ01447.1|  128|Apis mellifera hypothetical protein
           protein.
          Length = 128

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 273 AIRTLCENCPENQEVIAKTTLQGPVDNE 190
           A+   C  C E Q+ IA   +Q  +DN+
Sbjct: 70  ALENECSPCSEKQKKIADKVVQFLIDNK 97


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 292 NAMGHIRHPHVV*KLSGKSG 233
           N   H+  PH+  K+ GK+G
Sbjct: 31  NCKRHVIKPHICRKICGKNG 50


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 247 TVFTQRADGEYD 282
           T+F QR DG++D
Sbjct: 171 TIFPQRTDGKHD 182


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 284 HCIIRGLRASILQQSNST 337
           H I++GL+ SI+  + +T
Sbjct: 271 HAILKGLKTSIILMNGTT 288


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = +1

Query: 316 IATVQ*HRNNVQVSHLFFILLILPAQIRQGPDQARFET 429
           +A  Q +R    +   + I    PA+ R   D ARFET
Sbjct: 4   VAAAQKNREMFAIKKSYSIENGYPARRRSLVDDARFET 41


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,028
Number of Sequences: 438
Number of extensions: 3884
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)