Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_C24
         (712 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    23   9.5  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   9.5  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   9.5  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 680 SITKPQYIYRYGIPVNLH 627
           S TKP  I RY IP+ L+
Sbjct: 193 SYTKPTPIQRYAIPIILN 210


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 503 LLYYCIYLSLRVKMFKH 453
           L+YY   L L+V +FKH
Sbjct: 863 LVYYTYKLELKVWLFKH 879


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -2

Query: 633 PPLPVKLWGIEVVSGNAVNWL 571
           P +P+++ G+E+ S  A+ +L
Sbjct: 717 PEIPIRVGGLEIRSKQAIRYL 737


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 712,015
Number of Sequences: 2352
Number of extensions: 13831
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)