BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_C24
(712 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 26 0.31
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 24 1.6
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 24 1.6
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 24 1.6
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 24 1.6
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 23 2.2
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 23 2.9
DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1 pr... 23 2.9
AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-ri... 23 2.9
AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein. 23 2.9
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 3.8
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 5.0
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 6.6
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 6.6
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 6.6
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 6.6
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 6.6
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 6.6
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 6.6
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 6.6
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 6.6
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 8.7
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 21 8.7
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 21 8.7
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.7
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 8.7
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 8.7
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 8.7
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 26.2 bits (55), Expect = 0.31
Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Frame = -3
Query: 146 HSGQNLNKYK-----HHEMKNIHIKSSSEKNQMS 60
HSG +L K + HH+++N HI+ + N+ S
Sbjct: 137 HSGSSLTKSRLMRCLHHDIENAHIRRTLHMNRTS 170
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 128 NKYKHHEMKNIHIKSSSEKN--QMSYYNYNY 42
N YK+ N + + + N ++ YYN NY
Sbjct: 87 NNYKYSNYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 128 NKYKHHEMKNIHIKSSSEKN--QMSYYNYNY 42
N YK+ N + + + N ++ YYN NY
Sbjct: 87 NNYKYSNYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 128 NKYKHHEMKNIHIKSSSEKN--QMSYYNYNY 42
N YK+ N + + + N ++ YYN NY
Sbjct: 87 NNYKYSNYNNYNNNNYNNNNYKKLQYYNINY 117
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.6
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 128 NKYKHHEMKNIHIKSSSEKN--QMSYYNYNY 42
N YK+ N + + + N ++ YYN NY
Sbjct: 87 NNYKYSNYNNYNNNNYNNNNYKKLQYYNINY 117
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 23.4 bits (48), Expect = 2.2
Identities = 6/20 (30%), Positives = 14/20 (70%)
Frame = -3
Query: 95 HIKSSSEKNQMSYYNYNYSV 36
H+++ +EK+ Y YN+++
Sbjct: 351 HVQAEAEKHAAMLYQYNFNI 370
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 23.0 bits (47), Expect = 2.9
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 283 WNWWEILRPN 312
WNW +LRPN
Sbjct: 26 WNWNTLLRPN 35
>DQ485318-1|ABF21077.1| 223|Apis mellifera icarapin variant 1
precursor protein.
Length = 223
Score = 23.0 bits (47), Expect = 2.9
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 283 WNWWEILRPN 312
WNW +LRPN
Sbjct: 70 WNWNTLLRPN 79
>AY939856-1|AAX33236.1| 223|Apis mellifera venom carbohydrate-rich
protein precursor protein.
Length = 223
Score = 23.0 bits (47), Expect = 2.9
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 283 WNWWEILRPN 312
WNW +LRPN
Sbjct: 70 WNWNTLLRPN 79
>AY897570-1|AAW81036.1| 223|Apis mellifera venom protein 2 protein.
Length = 223
Score = 23.0 bits (47), Expect = 2.9
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 283 WNWWEILRPN 312
WNW +LRPN
Sbjct: 70 WNWNTLLRPN 79
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 3.8
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 41 NNYNCNNSFGSFLN 82
NNYN NN++ ++ N
Sbjct: 90 NNYNYNNNYNNYNN 103
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 22.2 bits (45), Expect = 5.0
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -3
Query: 128 NKYKHHEMKNIHIKSSSEKNQMSYYNYNY 42
N YK+ N + ++ N + YN NY
Sbjct: 320 NNYKYSNYNNYNNNYNNYNNYNNNYNNNY 348
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/29 (27%), Positives = 13/29 (44%)
Frame = -3
Query: 128 NKYKHHEMKNIHIKSSSEKNQMSYYNYNY 42
N Y + N + ++ + YYN NY
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINY 115
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/29 (27%), Positives = 13/29 (44%)
Frame = -3
Query: 128 NKYKHHEMKNIHIKSSSEKNQMSYYNYNY 42
N Y + N + ++ + YYN NY
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINY 115
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/29 (27%), Positives = 13/29 (44%)
Frame = -3
Query: 128 NKYKHHEMKNIHIKSSSEKNQMSYYNYNY 42
N Y + N + ++ + YYN NY
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINY 115
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/29 (27%), Positives = 13/29 (44%)
Frame = -3
Query: 128 NKYKHHEMKNIHIKSSSEKNQMSYYNYNY 42
N Y + N + ++ + YYN NY
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINY 115
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/29 (27%), Positives = 13/29 (44%)
Frame = -3
Query: 128 NKYKHHEMKNIHIKSSSEKNQMSYYNYNY 42
N Y + N + ++ + YYN NY
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINY 115
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/29 (27%), Positives = 13/29 (44%)
Frame = -3
Query: 128 NKYKHHEMKNIHIKSSSEKNQMSYYNYNY 42
N Y + N + ++ + YYN NY
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINY 115
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/29 (27%), Positives = 13/29 (44%)
Frame = -3
Query: 128 NKYKHHEMKNIHIKSSSEKNQMSYYNYNY 42
N Y + N + ++ + YYN NY
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINY 115
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/29 (27%), Positives = 13/29 (44%)
Frame = -3
Query: 128 NKYKHHEMKNIHIKSSSEKNQMSYYNYNY 42
N Y + N + ++ + YYN NY
Sbjct: 87 NNYNYSNYNNYNNNNNYNNYKKLYYNINY 115
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -3
Query: 104 KNIHIKSSSEKNQMSYYNYN 45
K IH ++ N + YNYN
Sbjct: 88 KTIHNNNNYNNNNYNNYNYN 107
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 380 PLSHKLPLLYYQQKHKQKASEXAFG 306
P+ +P LY+ + QKA A G
Sbjct: 159 PMYEVMPHLYFNDEVMQKAYNIAMG 183
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +2
Query: 41 NNYNCNNSFGSF 76
NNYN NN++ ++
Sbjct: 90 NNYNYNNNYNNY 101
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +2
Query: 41 NNYNCNNSFGSF 76
NNYN NN++ ++
Sbjct: 90 NNYNYNNNYNNY 101
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +2
Query: 41 NNYNCNNSFGSF 76
NNYN NN++ ++
Sbjct: 90 NNYNYNNNYNNY 101
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +2
Query: 41 NNYNCNNSFGSF 76
NNYN NN++ ++
Sbjct: 90 NNYNYNNNYNNY 101
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +2
Query: 41 NNYNCNNSFGSF 76
NNYN NN++ ++
Sbjct: 90 NNYNYNNNYNNY 101
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +2
Query: 41 NNYNCNNSFGSF 76
NNYN NN++ ++
Sbjct: 90 NNYNYNNNYNNY 101
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +2
Query: 41 NNYNCNNSFGSF 76
NNYN NN++ ++
Sbjct: 90 NNYNYNNNYNNY 101
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +2
Query: 41 NNYNCNNSFGSF 76
NNYN NN++ ++
Sbjct: 90 NNYNYNNNYNNY 101
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +2
Query: 41 NNYNCNNSFGSF 76
NNYN NN++ ++
Sbjct: 90 NNYNYNNNYNNY 101
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 8.7
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = -2
Query: 447 IGKKLVELGFAKASFPK--ELK-KNTIESQIAPALLSAEAQAKSLRXGIWSEN 298
IG L + F P E+K KN + PA+L EAQ + +W+ N
Sbjct: 761 IGAGLSAVIFISVQAPPHFEIKLKNQTARRGEPAVLQCEAQGEKPIGILWNMN 813
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.4 bits (43), Expect = 8.7
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 380 PLSHKLPLLYYQQKHKQKASEXAFG 306
P+ +P LY+ + QKA A G
Sbjct: 159 PMYEVMPHLYFNDEVMQKAYNIAMG 183
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +2
Query: 41 NNYNCNNSFGSF 76
NNYN NN++ ++
Sbjct: 323 NNYNYNNNYNNY 334
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 8.7
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +2
Query: 41 NNYNCNNSFGSF 76
NNYN NN++ ++
Sbjct: 323 NNYNYNNNYNNY 334
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,875
Number of Sequences: 438
Number of extensions: 4284
Number of successful extensions: 55
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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