Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_C22
         (316 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81531-6|CAB04317.2|  330|Caenorhabditis elegans Hypothetical pr...    31   0.23 
Z81502-6|CAB04109.3|  345|Caenorhabditis elegans Hypothetical pr...    27   3.8  
AL117193-13|CAB55004.2|  478|Caenorhabditis elegans Hypothetical...    27   3.8  
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr...    26   5.0  
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr...    26   5.0  
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha...    26   5.0  
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha...    26   5.0  
Z92804-1|CAB07252.1|  338|Caenorhabditis elegans Hypothetical pr...    25   8.7  
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr...    25   8.7  
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr...    25   8.7  
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr...    25   8.7  
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr...    25   8.7  
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p...    25   8.7  
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p...    25   8.7  
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p...    25   8.7  
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr...    25   8.7  

>Z81531-6|CAB04317.2|  330|Caenorhabditis elegans Hypothetical
           protein F36D3.6 protein.
          Length = 330

 Score = 30.7 bits (66), Expect = 0.23
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = -1

Query: 187 PYVVPLPYAATAGYPLSYVSSLSVPTV 107
           P+V+   YAA AGYPL  +  L VPT+
Sbjct: 72  PFVI---YAAVAGYPLGVIVYLGVPTI 95


>Z81502-6|CAB04109.3|  345|Caenorhabditis elegans Hypothetical
           protein F14B6.6a protein.
          Length = 345

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +2

Query: 218 HCDQKRLKH-FDNLSLAKFDCTRFALKSAGRIHL 316
           +C ++ LK+ F   SL  F CTR+A   AG  +L
Sbjct: 220 NCCKRFLKYNFRRNSLISFGCTRYAFYLAGPFYL 253


>AL117193-13|CAB55004.2|  478|Caenorhabditis elegans Hypothetical
           protein Y105C5A.24 protein.
          Length = 478

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 240 LRRF*SQCWLSSPARRPTRMWCL 172
           L  F  +CW  +PA RPT   C+
Sbjct: 270 LSNFYKRCWSDNPASRPTSADCV 292


>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
            K08C7.3b protein.
          Length = 3672

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -3

Query: 203  LRGGRPVC--GASAVRCNCRLPPFXRVILICTYRLQLCIHRLL 81
            +R G+  C  GA+  RC+  LP + R+      R   C+H L+
Sbjct: 2098 VRTGQCHCQEGATGSRCDQCLPSYLRIPTYGCRRCDECVHHLI 2140


>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
            K08C7.3a protein.
          Length = 3704

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -3

Query: 203  LRGGRPVC--GASAVRCNCRLPPFXRVILICTYRLQLCIHRLL 81
            +R G+  C  GA+  RC+  LP + R+      R   C+H L+
Sbjct: 2098 VRTGQCHCQEGATGSRCDQCLPSYLRIPTYGCRRCDECVHHLI 2140


>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
            chain protein.
          Length = 3704

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -3

Query: 203  LRGGRPVC--GASAVRCNCRLPPFXRVILICTYRLQLCIHRLL 81
            +R G+  C  GA+  RC+  LP + R+      R   C+H L+
Sbjct: 2098 VRTGQCHCQEGATGSRCDQCLPSYLRIPTYGCRRCDECVHHLI 2140


>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
            protein.
          Length = 3704

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -3

Query: 203  LRGGRPVC--GASAVRCNCRLPPFXRVILICTYRLQLCIHRLL 81
            +R G+  C  GA+  RC+  LP + R+      R   C+H L+
Sbjct: 2098 VRTGQCHCQEGATGSRCDQCLPSYLRIPTYGCRRCDECVHHLI 2140


>Z92804-1|CAB07252.1|  338|Caenorhabditis elegans Hypothetical
           protein K05D4.2 protein.
          Length = 338

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 16  CMYLL*HFIYEXYNHLH 66
           C+ LL +F Y+ YNHL+
Sbjct: 218 CLILLTYFGYQTYNHLY 234


>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical
           protein F07A11.6e protein.
          Length = 2101

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
 Frame = -2

Query: 204 PARRPTRMWCLCRTLQLPATPFXTCHPYL----YLPSTA 100
           PA    R   LC     P+TPF T  P L    +LP T+
Sbjct: 469 PAELAQRSHSLCIGPMTPSTPFPTSQPLLVNTTHLPGTS 507


>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
           protein F07A11.6c protein.
          Length = 2392

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
 Frame = -2

Query: 204 PARRPTRMWCLCRTLQLPATPFXTCHPYL----YLPSTA 100
           PA    R   LC     P+TPF T  P L    +LP T+
Sbjct: 760 PAELAQRSHSLCIGPMTPSTPFPTSQPLLVNTTHLPGTS 798


>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
           protein F07A11.6b protein.
          Length = 2407

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
 Frame = -2

Query: 204 PARRPTRMWCLCRTLQLPATPFXTCHPYL----YLPSTA 100
           PA    R   LC     P+TPF T  P L    +LP T+
Sbjct: 775 PAELAQRSHSLCIGPMTPSTPFPTSQPLLVNTTHLPGTS 813


>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
           protein F07A11.6a protein.
          Length = 2211

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
 Frame = -2

Query: 204 PARRPTRMWCLCRTLQLPATPFXTCHPYL----YLPSTA 100
           PA    R   LC     P+TPF T  P L    +LP T+
Sbjct: 775 PAELAQRSHSLCIGPMTPSTPFPTSQPLLVNTTHLPGTS 813


>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
           protein F07A11.6e protein.
          Length = 2101

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
 Frame = -2

Query: 204 PARRPTRMWCLCRTLQLPATPFXTCHPYL----YLPSTA 100
           PA    R   LC     P+TPF T  P L    +LP T+
Sbjct: 469 PAELAQRSHSLCIGPMTPSTPFPTSQPLLVNTTHLPGTS 507


>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
           protein F07A11.6c protein.
          Length = 2392

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
 Frame = -2

Query: 204 PARRPTRMWCLCRTLQLPATPFXTCHPYL----YLPSTA 100
           PA    R   LC     P+TPF T  P L    +LP T+
Sbjct: 760 PAELAQRSHSLCIGPMTPSTPFPTSQPLLVNTTHLPGTS 798


>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
           protein F07A11.6b protein.
          Length = 2407

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
 Frame = -2

Query: 204 PARRPTRMWCLCRTLQLPATPFXTCHPYL----YLPSTA 100
           PA    R   LC     P+TPF T  P L    +LP T+
Sbjct: 775 PAELAQRSHSLCIGPMTPSTPFPTSQPLLVNTTHLPGTS 813


>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
           protein F07A11.6a protein.
          Length = 2211

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
 Frame = -2

Query: 204 PARRPTRMWCLCRTLQLPATPFXTCHPYL----YLPSTA 100
           PA    R   LC     P+TPF T  P L    +LP T+
Sbjct: 775 PAELAQRSHSLCIGPMTPSTPFPTSQPLLVNTTHLPGTS 813


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,013,364
Number of Sequences: 27780
Number of extensions: 129590
Number of successful extensions: 355
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 355
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 355337994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)