Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_C21
         (562 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-9|AAN63393.1|  683|Caenorhabditis elegans Aconitase prote...   110   6e-25
L25599-8|AAL65788.1|  665|Caenorhabditis elegans Aconitase prote...   110   6e-25
L25599-7|AAA28050.2|  777|Caenorhabditis elegans Aconitase prote...   110   6e-25
U58761-3|AAB00714.4|  456|Caenorhabditis elegans Hypothetical pr...    28   5.3  
U14635-7|AAC46658.2|  521|Caenorhabditis elegans Hypothetical pr...    28   5.3  
U14635-6|AAP86617.1|  517|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z68301-9|CAA92628.1|  456|Caenorhabditis elegans Hypothetical pr...    27   7.0  
Z68299-8|CAA92615.1|  456|Caenorhabditis elegans Hypothetical pr...    27   7.0  

>L25599-9|AAN63393.1|  683|Caenorhabditis elegans Aconitase protein
           2, isoform c protein.
          Length = 683

 Score =  110 bits (265), Expect = 6e-25
 Identities = 49/77 (63%), Positives = 59/77 (76%)
 Frame = -2

Query: 561 QGMLPLTFAXAADYDKIKPDDKISLLGLNSLAPGKPVDCEIKHKDGSTDRIKLNHSLNDQ 382
           QGMLPLTFA  ADYDKI P D +S++GL+S APGKP+    K  +GS   + LNH+ N+Q
Sbjct: 602 QGMLPLTFANPADYDKIDPSDNVSIVGLSSFAPGKPLTAIFKKTNGSKVEVTLNHTFNEQ 661

Query: 381 QINWFKAGSALNRMKEI 331
           QI WFKAGSALNRMKE+
Sbjct: 662 QIEWFKAGSALNRMKEV 678


>L25599-8|AAL65788.1|  665|Caenorhabditis elegans Aconitase protein
           2, isoform b protein.
          Length = 665

 Score =  110 bits (265), Expect = 6e-25
 Identities = 49/77 (63%), Positives = 59/77 (76%)
 Frame = -2

Query: 561 QGMLPLTFAXAADYDKIKPDDKISLLGLNSLAPGKPVDCEIKHKDGSTDRIKLNHSLNDQ 382
           QGMLPLTFA  ADYDKI P D +S++GL+S APGKP+    K  +GS   + LNH+ N+Q
Sbjct: 584 QGMLPLTFANPADYDKIDPSDNVSIVGLSSFAPGKPLTAIFKKTNGSKVEVTLNHTFNEQ 643

Query: 381 QINWFKAGSALNRMKEI 331
           QI WFKAGSALNRMKE+
Sbjct: 644 QIEWFKAGSALNRMKEV 660


>L25599-7|AAA28050.2|  777|Caenorhabditis elegans Aconitase protein
           2, isoform a protein.
          Length = 777

 Score =  110 bits (265), Expect = 6e-25
 Identities = 49/77 (63%), Positives = 59/77 (76%)
 Frame = -2

Query: 561 QGMLPLTFAXAADYDKIKPDDKISLLGLNSLAPGKPVDCEIKHKDGSTDRIKLNHSLNDQ 382
           QGMLPLTFA  ADYDKI P D +S++GL+S APGKP+    K  +GS   + LNH+ N+Q
Sbjct: 696 QGMLPLTFANPADYDKIDPSDNVSIVGLSSFAPGKPLTAIFKKTNGSKVEVTLNHTFNEQ 755

Query: 381 QINWFKAGSALNRMKEI 331
           QI WFKAGSALNRMKE+
Sbjct: 756 QIEWFKAGSALNRMKEV 772


>U58761-3|AAB00714.4|  456|Caenorhabditis elegans Hypothetical
           protein C01F1.6 protein.
          Length = 456

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +2

Query: 383 WSFNEWLSLMRSVLPS-LCLISQSTGL 460
           W F  W+ L+  +LPS +CLI +   L
Sbjct: 144 WDFQSWIPLLSRILPSDVCLIYKKGNL 170


>U14635-7|AAC46658.2|  521|Caenorhabditis elegans Hypothetical
           protein C27H5.4a protein.
          Length = 521

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = +2

Query: 347 LSAEPALNQLICWSFNEWLSLMRSVLPSLCLISQS 451
           LS  P + +  C ++++W+ L  ++ P++C I +S
Sbjct: 466 LSGYPTVAE--CTNYSQWMFLALAIFPAICAIGES 498


>U14635-6|AAP86617.1|  517|Caenorhabditis elegans Hypothetical
           protein C27H5.4b protein.
          Length = 517

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 10/35 (28%), Positives = 22/35 (62%)
 Frame = +2

Query: 347 LSAEPALNQLICWSFNEWLSLMRSVLPSLCLISQS 451
           LS  P + +  C ++++W+ L  ++ P++C I +S
Sbjct: 462 LSGYPTVAE--CTNYSQWMFLALAIFPAICAIGES 494


>Z68301-9|CAA92628.1|  456|Caenorhabditis elegans Hypothetical
           protein T04B2.5 protein.
          Length = 456

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 525 DYDKI-KPDDKISLLGLNSLAPGKPVDCEIKHKDGSTDRIK 406
           +YD   K    I L G+ S+  G+P   E K+K G + R K
Sbjct: 316 EYDSFSKHQQPIHLAGVLSIGTGEPALAERKYKSGKSIRAK 356


>Z68299-8|CAA92615.1|  456|Caenorhabditis elegans Hypothetical
           protein T04B2.5 protein.
          Length = 456

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 525 DYDKI-KPDDKISLLGLNSLAPGKPVDCEIKHKDGSTDRIK 406
           +YD   K    I L G+ S+  G+P   E K+K G + R K
Sbjct: 316 EYDSFSKHQQPIHLAGVLSIGTGEPALAERKYKSGKSIRAK 356


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,945,844
Number of Sequences: 27780
Number of extensions: 172949
Number of successful extensions: 477
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)