Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_C21
         (562 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    22   4.9  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   8.5  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   8.5  

>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 162 NDYNTAA*IQFHTLRQLGTHPNNTFKI 242
           + + TAA I + TL  +  HP+ TF +
Sbjct: 121 SSHPTAAFISYGTLFFIYVHPSATFSL 147


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 151 NSFKTITIQPRKYN 192
           N+FKT+T +P+  N
Sbjct: 136 NAFKTLTQEPKNTN 149


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +2

Query: 104 MYYLNYTMTRLHWLHLIPLKRLQYSRVN 187
           +YY   T   L+++++ P  + QY   N
Sbjct: 266 LYYSPLTSHSLYYVNMEPFMKSQYEENN 293


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,580
Number of Sequences: 438
Number of extensions: 2035
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)