Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_C19
         (650 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC002331-1|AAH02331.1|  166|Homo sapiens chromosome 11 open read...   127   3e-29
AK000494-1|BAA91204.1|  166|Homo sapiens protein ( Homo sapiens ...   127   3e-29
DQ335469-1|ABC59821.1| 5005|Homo sapiens fragile site-associated...    30   6.2  
AK124902-1|BAC85988.1| 1168|Homo sapiens protein ( Homo sapiens ...    30   6.2  

>BC002331-1|AAH02331.1|  166|Homo sapiens chromosome 11 open reading
           frame 79 protein.
          Length = 166

 Score =  127 bits (307), Expect = 3e-29
 Identities = 61/120 (50%), Positives = 81/120 (67%), Gaps = 1/120 (0%)
 Frame = -3

Query: 405 SNTTNNMDTTYMEIPLYDVEKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFN 226
           S T +  D   + +P +     + +E ++ARL Y+SRKRGMLEN +LLS FAK++L    
Sbjct: 39  SPTDSQKDMIEIPLPPWQERTDESIETKRARLLYESRKRGMLENCILLSLFAKEHLQHMT 98

Query: 225 EKQTMMYDRLINSPSNDWDIFYWIVEKKPTPKEFDNEIMNLLXXHAKNEDK-IALRQPEL 49
           EKQ  +YDRLIN PSNDWDI+YW  E KP P+ F+NE+M LL   AKN++K   LR P+L
Sbjct: 99  EKQLNLYDRLINEPSNDWDIYYWATEAKPAPEIFENEVMALLRDFAKNKNKEQRLRAPDL 158


>AK000494-1|BAA91204.1|  166|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20487 fis, clone KAT08245. ).
          Length = 166

 Score =  127 bits (307), Expect = 3e-29
 Identities = 61/120 (50%), Positives = 81/120 (67%), Gaps = 1/120 (0%)
 Frame = -3

Query: 405 SNTTNNMDTTYMEIPLYDVEKQQPLEKRKARLHYQSRKRGMLENDLLLSTFAKKYLNGFN 226
           S T +  D   + +P +     + +E ++ARL Y+SRKRGMLEN +LLS FAK++L    
Sbjct: 39  SPTDSQKDMIEIPLPPWQERTDESIETKRARLLYESRKRGMLENCILLSLFAKEHLQHMT 98

Query: 225 EKQTMMYDRLINSPSNDWDIFYWIVEKKPTPKEFDNEIMNLLXXHAKNEDK-IALRQPEL 49
           EKQ  +YDRLIN PSNDWDI+YW  E KP P+ F+NE+M LL   AKN++K   LR P+L
Sbjct: 99  EKQLNLYDRLINEPSNDWDIYYWATEAKPAPEIFENEVMALLRDFAKNKNKEQRLRAPDL 158


>DQ335469-1|ABC59821.1| 5005|Homo sapiens fragile site-associated
           protein protein.
          Length = 5005

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = -3

Query: 291 RGMLENDLLLSTFAKKYLNGFN-EKQTMMYDRLINSPSNDWDIFYWIVEKKPTPKEFDNE 115
           +G LEN  ++   + +Y+   N E   +M +  +   SND DI+Y++ E    P+E +  
Sbjct: 251 KGKLENVRVMLVPSPRYVGLQNDEPPRLMGEGFVVMQSNDVDIYYYMDEPGLVPEETEEN 310

Query: 114 I 112
           I
Sbjct: 311 I 311


>AK124902-1|BAC85988.1| 1168|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42912 fis, clone BRHIP3024533. ).
          Length = 1168

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = -3

Query: 291 RGMLENDLLLSTFAKKYLNGFN-EKQTMMYDRLINSPSNDWDIFYWIVEKKPTPKEFDNE 115
           +G LEN  ++   + +Y+   N E   +M +  +   SND DI+Y++ E    P+E +  
Sbjct: 5   KGKLENVRVMLVPSPRYVGLQNDEPPRLMGEGFVVMQSNDVDIYYYMDEPGLVPEETEEN 64

Query: 114 I 112
           I
Sbjct: 65  I 65


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,787,513
Number of Sequences: 237096
Number of extensions: 1728669
Number of successful extensions: 6704
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6704
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)