Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_C18
(326 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83113-2|CAB05544.1| 479|Caenorhabditis elegans Hypothetical pr... 28 1.8
U23516-7|ABC71838.1| 63|Caenorhabditis elegans Hypothetical pr... 28 1.8
U21324-5|AAN63436.1| 486|Caenorhabditis elegans Hypothetical pr... 27 3.2
U21324-4|AAN63435.1| 537|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z81562-5|CAB04555.1| 408|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z69902-1|CAA93767.1| 689|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z37092-10|CAA85459.1| 280|Caenorhabditis elegans Hypothetical p... 27 4.2
Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical pr... 26 5.6
AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical ... 26 5.6
AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical ... 26 5.6
Z81134-7|CAD56602.1| 879|Caenorhabditis elegans Hypothetical pr... 26 7.4
Z81134-6|CAB03450.2| 795|Caenorhabditis elegans Hypothetical pr... 26 7.4
U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical p... 26 7.4
AL117202-32|CAD56611.1| 879|Caenorhabditis elegans Hypothetical... 26 7.4
AL117202-31|CAD56610.1| 795|Caenorhabditis elegans Hypothetical... 26 7.4
U97196-6|AAB52455.1| 373|Caenorhabditis elegans Hypothetical pr... 25 9.7
>Z83113-2|CAB05544.1| 479|Caenorhabditis elegans Hypothetical
protein K08H10.4 protein.
Length = 479
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 223 GVDGTYFFTFDILIVIDTCFPYEQTAGHRPA 315
G D + F + I+++T F E T GH+PA
Sbjct: 168 GSDEGVYSWFTLNILLETLFTDEPTVGHKPA 198
>U23516-7|ABC71838.1| 63|Caenorhabditis elegans Hypothetical
protein B0416.7b protein.
Length = 63
Score = 27.9 bits (59), Expect = 1.8
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -2
Query: 205 LEDTKSSLPIWTILIQSPYVYSI 137
LE+ K + WT+++ S ++YSI
Sbjct: 9 LEECKKMMDFWTVILNSKWLYSI 31
>U21324-5|AAN63436.1| 486|Caenorhabditis elegans Hypothetical
protein C35D10.7b protein.
Length = 486
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -1
Query: 263 IRMSKVKKYVPSTPEFEKTIGRYKEFVANLDDPDSEPIRVFDPLSQSMLEE 111
I M K VPS + K + F L + EP++VF+ L Q MLE+
Sbjct: 372 ISMIPKVKDVPSVVQLAKECKMWSAFERILKQYNFEPLKVFEEL-QKMLEK 421
>U21324-4|AAN63435.1| 537|Caenorhabditis elegans Hypothetical
protein C35D10.7a protein.
Length = 537
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = -1
Query: 263 IRMSKVKKYVPSTPEFEKTIGRYKEFVANLDDPDSEPIRVFDPLSQSMLEE 111
I M K VPS + K + F L + EP++VF+ L Q MLE+
Sbjct: 423 ISMIPKVKDVPSVVQLAKECKMWSAFERILKQYNFEPLKVFEEL-QKMLEK 472
>Z81562-5|CAB04555.1| 408|Caenorhabditis elegans Hypothetical
protein K03D7.8 protein.
Length = 408
Score = 26.6 bits (56), Expect = 4.2
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = -3
Query: 324 NEFGRPMTGCLFVREA 277
+EFGRP++GC+ VR +
Sbjct: 200 DEFGRPVSGCVCVRRS 215
>Z69902-1|CAA93767.1| 689|Caenorhabditis elegans Hypothetical
protein C47D12.2 protein.
Length = 689
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 106 ASSSSILCDRGSNTRMGSESGSSRLATNSLYLPMVFSNSGVDGTY 240
+SS+S D + SE+ ++ AT Y+P+VF N+ + TY
Sbjct: 142 SSSTSSSSDEEDDDEQKSENENNNGATK--YIPIVFQNTAEEFTY 184
>Z37092-10|CAA85459.1| 280|Caenorhabditis elegans Hypothetical
protein F44F4.10 protein.
Length = 280
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 127 CDRGSNTRMGSESGSSRLATNSLYLPMVFSNSGVD 231
C G N + G+SR NS+Y P+ + S D
Sbjct: 34 CPYGKNQAESVDDGNSRTPYNSIYEPLSLNKSKPD 68
>Z81082-6|CAB03098.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 127 CDRGSNTRMGSESGSSRLATNSLYLPMVFSNSGVDG 234
C G N + G+SR NS+Y P+ + DG
Sbjct: 34 CTYGKNLVESVDDGNSRTPYNSIYEPLSLNKPKPDG 69
>AL034543-5|CAA22519.1| 279|Caenorhabditis elegans Hypothetical
protein F42G4.6 protein.
Length = 279
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 127 CDRGSNTRMGSESGSSRLATNSLYLPMVFSNSGVDG 234
C G N + G+SR NS+Y P+ + DG
Sbjct: 34 CTYGKNLVESVDDGNSRTPYNSIYEPLSLNKPKPDG 69
>AL034543-1|CAA22516.1| 243|Caenorhabditis elegans Hypothetical
protein Y81G3A.1 protein.
Length = 243
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1
Query: 127 CDRGSNTRMGSESGSSRLATNSLYLPMVFSNSGVDG 234
C G N + G+SR NS+Y P+ + DG
Sbjct: 34 CTYGKNLVESVDDGNSRTPYNSIYEPLSLNKPKPDG 69
>Z81134-7|CAD56602.1| 879|Caenorhabditis elegans Hypothetical
protein T28D6.5b protein.
Length = 879
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -1
Query: 200 RYKEFVANLDDPDSEPIRVFDPLSQSMLEELALIRDVK*ILAEEE 66
R E LD P+ +P+R DPL++ L+ I +K + EE+
Sbjct: 650 RIDEMEGQLDIPELKPLRSDDPLAEP-LDAPVPINSIKGSVDEED 693
>Z81134-6|CAB03450.2| 795|Caenorhabditis elegans Hypothetical
protein T28D6.5a protein.
Length = 795
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -1
Query: 200 RYKEFVANLDDPDSEPIRVFDPLSQSMLEELALIRDVK*ILAEEE 66
R E LD P+ +P+R DPL++ L+ I +K + EE+
Sbjct: 650 RIDEMEGQLDIPELKPLRSDDPLAEP-LDAPVPINSIKGSVDEED 693
>U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical
protein C32E8.11 protein.
Length = 1927
Score = 25.8 bits (54), Expect = 7.4
Identities = 8/28 (28%), Positives = 19/28 (67%)
Frame = -3
Query: 315 GRPMTGCLFVREARIYNNKNVKGKKVRA 232
G+PM F+++++++ +KN G+ + A
Sbjct: 1154 GKPMVCAAFIQQSQLFTHKNKNGELMTA 1181
>AL117202-32|CAD56611.1| 879|Caenorhabditis elegans Hypothetical
protein T28D6.5b protein.
Length = 879
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -1
Query: 200 RYKEFVANLDDPDSEPIRVFDPLSQSMLEELALIRDVK*ILAEEE 66
R E LD P+ +P+R DPL++ L+ I +K + EE+
Sbjct: 650 RIDEMEGQLDIPELKPLRSDDPLAEP-LDAPVPINSIKGSVDEED 693
>AL117202-31|CAD56610.1| 795|Caenorhabditis elegans Hypothetical
protein T28D6.5a protein.
Length = 795
Score = 25.8 bits (54), Expect = 7.4
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -1
Query: 200 RYKEFVANLDDPDSEPIRVFDPLSQSMLEELALIRDVK*ILAEEE 66
R E LD P+ +P+R DPL++ L+ I +K + EE+
Sbjct: 650 RIDEMEGQLDIPELKPLRSDDPLAEP-LDAPVPINSIKGSVDEED 693
>U97196-6|AAB52455.1| 373|Caenorhabditis elegans Hypothetical
protein B0207.7 protein.
Length = 373
Score = 25.4 bits (53), Expect = 9.7
Identities = 8/27 (29%), Positives = 18/27 (66%)
Frame = -1
Query: 230 STPEFEKTIGRYKEFVANLDDPDSEPI 150
STP+++ + +++ A L+ +SEP+
Sbjct: 273 STPDYQMMLNHFQQMYARLEIDESEPM 299
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,482,883
Number of Sequences: 27780
Number of extensions: 119236
Number of successful extensions: 391
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 391
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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