Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_C18
(326 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 1.6
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 22 2.2
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 22 2.2
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 22 2.2
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 21 5.0
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 20 6.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 20 6.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 20 6.6
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 20 6.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 20 6.6
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 20 8.8
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 20 8.8
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 20 8.8
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 20 8.8
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.2 bits (45), Expect = 1.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 324 NEFGRPMTGCLFVREARI 271
NE R ++G L +REAR+
Sbjct: 262 NERVRQVSGTLIIREARV 279
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 2.2
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 208 PLEDTKSSLPIW 173
P E+T S+LP+W
Sbjct: 23 PEEETGSNLPVW 34
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.8 bits (44), Expect = 2.2
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 208 PLEDTKSSLPIW 173
P E+T S+LP+W
Sbjct: 23 PEEETGSNLPVW 34
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.8 bits (44), Expect = 2.2
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 208 PLEDTKSSLPIW 173
P E+T S+LP+W
Sbjct: 23 PEEETGSNLPVW 34
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 20.6 bits (41), Expect = 5.0
Identities = 8/36 (22%), Positives = 19/36 (52%)
Frame = -1
Query: 284 GKHVSITIRMSKVKKYVPSTPEFEKTIGRYKEFVAN 177
GK++++++ S PE + + +++FV N
Sbjct: 249 GKNLNLSLHASLNHTLTKDQPETYELVKEWRDFVDN 284
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 20.2 bits (40), Expect = 6.6
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -1
Query: 275 VSITIRMSKVKKYVPSTPEFEKTIGRY 195
+S+T+ ++ V + +P+T + IG Y
Sbjct: 234 LSLTVFLNLVAESMPTTSDAVPLIGSY 260
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 20.2 bits (40), Expect = 6.6
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -1
Query: 275 VSITIRMSKVKKYVPSTPEFEKTIGRY 195
+S+T+ ++ V + +P+T + IG Y
Sbjct: 234 LSLTVFLNLVAESMPTTSDAVPLIGSY 260
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 20.2 bits (40), Expect = 6.6
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -1
Query: 275 VSITIRMSKVKKYVPSTPEFEKTIGRY 195
+S+T+ ++ V + +P+T + IG Y
Sbjct: 234 LSLTVFLNLVAESMPTTSDAVPLIGSY 260
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 20.2 bits (40), Expect = 6.6
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -3
Query: 324 NEFGRPMTGCLF 289
N++ P+TGCL+
Sbjct: 294 NQWVYPLTGCLY 305
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.2 bits (40), Expect = 6.6
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -1
Query: 275 VSITIRMSKVKKYVPSTPEFEKTIGRY 195
+S+T+ ++ V + +P+T + IG Y
Sbjct: 302 LSLTVFLNLVAESMPTTSDAVPLIGSY 328
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 19.8 bits (39), Expect = 8.8
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -1
Query: 212 KTIGRYKEFV 183
KT G+YKE++
Sbjct: 191 KTSGKYKEYI 200
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 19.8 bits (39), Expect = 8.8
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -1
Query: 212 KTIGRYKEFV 183
KT G+YKE++
Sbjct: 191 KTSGKYKEYI 200
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 19.8 bits (39), Expect = 8.8
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +1
Query: 109 SSSSILCDRGSNTRMGSESGSSRL 180
SSSS G R GSES S L
Sbjct: 416 SSSSAAGGEGLADRRGSESSDSVL 439
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 19.8 bits (39), Expect = 8.8
Identities = 7/27 (25%), Positives = 17/27 (62%)
Frame = -1
Query: 275 VSITIRMSKVKKYVPSTPEFEKTIGRY 195
+S+T+ ++ V + +P+T + +G Y
Sbjct: 271 LSLTVFLNMVAETMPATSDAVPLLGTY 297
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,777
Number of Sequences: 438
Number of extensions: 1533
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7217694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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