Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_C16
         (816 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    26   1.6  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       26   1.6  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       26   1.6  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       26   1.6  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    24   4.9  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   6.4  
AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    23   8.5  

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 626 YSNLRIAGCTCISNFVKIKESKCD 697
           YSNL I GC+ I +    K SK D
Sbjct: 237 YSNLHIFGCSAIVHVPAEKRSKLD 260


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 626 YSNLRIAGCTCISNFVKIKESKCD 697
           YSNL I GC+ I +    K SK D
Sbjct: 7   YSNLHIFGCSAIVHVPAEKRSKLD 30


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 626 YSNLRIAGCTCISNFVKIKESKCD 697
           YSNL I GC+ I +    K SK D
Sbjct: 7   YSNLHIFGCSAIVHVPAEKRSKLD 30


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 626 YSNLRIAGCTCISNFVKIKESKCD 697
           YSNL I GC+ I +    K SK D
Sbjct: 7   YSNLHIFGCSAIVHVPAEKRSKLD 30


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
 Frame = +2

Query: 263 LSIGCCCSVFPLTAANLSCSFFTSIASLS*LVSVG-CGIHWNTVAS 397
           L+   CC   P T+   +C+ F  +   +    +G  G H  T+AS
Sbjct: 173 LTFPACCMYIPFTSFYATCTLFALVQIAALKQRLGRLGRHSGTMAS 218


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 42  NFYSQLILGFVIWPLSFP*LVYFPFVISS 128
           NF    +L FV++  SFP   + P  ++S
Sbjct: 54  NFIFMFLLHFVLFSFSFPFFSFAPCTLAS 82


>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 113 IRNKLRRPLASRVLSSCSDGTAQKSSTRGAVPLRR 217
           +R   R+P  S +  +  +     +STR A+P RR
Sbjct: 219 VRKNRRKPKESVIPDNTGEKQVHPASTREALPPRR 253


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 830,320
Number of Sequences: 2352
Number of extensions: 17944
Number of successful extensions: 46
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86487024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)