Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_C13
         (770 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    33   0.013
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         25   3.4  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         25   3.4  
EF588645-1|ABQ96833.1|  161|Anopheles gambiae transposase protein.     24   4.5  
EF588613-1|ABQ96804.1|  161|Anopheles gambiae transposase protein.     24   4.5  
AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2 ...    24   6.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   6.0  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   7.9  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   7.9  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   7.9  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 32.7 bits (71), Expect = 0.013
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
 Frame = -3

Query: 507  LQQFLDHFKNEHKL-----EITMLSQGVCMLYSFFMPKAKRLERLNLPMSEVVTKVSK-- 349
            L QFL   + + KL     E+ +    +C L      +A+++E +     +V    S+  
Sbjct: 986  LDQFLSFSEQKEKLYKRKAELDVGKDKICELMQLL--EARKVEAIQFTFRQVAANFSEVF 1043

Query: 348  KKLEPHVNALVFELCCNDDDGNDVE 274
            KKL P  N  +     ND +GND+E
Sbjct: 1044 KKLVPQGNGHLILRTTNDQEGNDME 1068


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 11  PSXHHQNAAHHHLP 52
           P  HHQ+  HH LP
Sbjct: 91  PPHHHQHPHHHQLP 104


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 11  PSXHHQNAAHHHLP 52
           P  HHQ+  HH LP
Sbjct: 91  PPHHHQHPHHHQLP 104


>EF588645-1|ABQ96833.1|  161|Anopheles gambiae transposase protein.
          Length = 161

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -3

Query: 693 LVCLELYKLAQGFNKLEVFKNGFVNLALPFFGFSEPIAPSTNTYNE 556
           L CL+++K  +G N         V+  +P+   ++PI  + N  +E
Sbjct: 26  LYCLKVFKYTKGTNSNLKRDLNLVHKTVPYLKQNQPIPQTINIDDE 71


>EF588613-1|ABQ96804.1|  161|Anopheles gambiae transposase protein.
          Length = 161

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -3

Query: 693 LVCLELYKLAQGFNKLEVFKNGFVNLALPFFGFSEPIAPSTNTYNE 556
           L CL+++K  +G N         V+  +P+   ++PI  + N  +E
Sbjct: 26  LYCLKVFKYTKGTNSNLKRDLNLVHKTVPYLKQNQPIPQTINIDDE 71


>AY994094-1|AAX86007.1|   41|Anopheles gambiae metallothionein 2
           protein.
          Length = 41

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -1

Query: 461 SPCCLKVCACFIRSSCPKPSGWND*TCQ 378
           SP C   C C  R +CP   G  +  C+
Sbjct: 14  SPNCGAGCGCESRCTCPCKDGAKEGCCK 41


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = +2

Query: 167 IEPSLRSGNYYFSA 208
           +E +L+SGNY+F+A
Sbjct: 836 MEKALKSGNYFFTA 849


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 412 GHEERIKHAHTLRQHGD 462
           G EE++ H  T  +HGD
Sbjct: 737 GEEEKLSHEPTPTEHGD 753


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 9/29 (31%), Positives = 11/29 (37%)
 Frame = -1

Query: 440 CACFIRSSCPKPSGWND*TCQCRRWSQKC 354
           C C     C    GW    C CR  ++ C
Sbjct: 611 CVC---GQCECREGWTGPACDCRASNETC 636


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 250  QSVFYIRDLHIVPVIIIA 303
            +  +Y+ D+ IVPVII A
Sbjct: 1148 KQTWYLEDIRIVPVIISA 1165


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 804,040
Number of Sequences: 2352
Number of extensions: 17338
Number of successful extensions: 47
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80249979
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)