Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_C13
(770 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p... 187 9e-48
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p... 187 9e-48
Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical pr... 37 0.014
U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membran... 33 0.30
Z73905-4|CAI91175.1| 536|Caenorhabditis elegans Hypothetical pr... 30 1.6
AC006679-8|AAK84470.1| 630|Caenorhabditis elegans Hypothetical ... 30 2.1
Z81036-3|CAB02741.1| 357|Caenorhabditis elegans Hypothetical pr... 29 4.8
AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical ... 29 4.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 8.5
U97196-7|AAB52462.1| 141|Caenorhabditis elegans Hypothetical pr... 28 8.5
L25598-6|AAA27939.2| 886|Caenorhabditis elegans Hypothetical pr... 28 8.5
>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
protein C47E12.5b protein.
Length = 1028
Score = 187 bits (455), Expect = 9e-48
Identities = 93/177 (52%), Positives = 125/177 (70%), Gaps = 5/177 (2%)
Frame = -3
Query: 768 DRHRXKLIAGKIIPAIATTTSVVAGLVCLELYKL--AQGFNK--LEVFKNGFVNLALPFF 601
DR R K IAGKIIPAIATTT+ VAGLVC+ELYK+ A G K +E FKN F+NL++PFF
Sbjct: 851 DRMRTKQIAGKIIPAIATTTAAVAGLVCIELYKVVDANGIPKTPMERFKNTFLNLSMPFF 910
Query: 600 GFSEPIAPSTNTYNENKWTLWDRFEVKGEITLQQFLDHFKNEHK-LEITMLSQGVCMLYS 424
+EPI TY + ++TLWDR +V+G +TLQ+F+D+ +N+ E++MLS G C+L+S
Sbjct: 911 SSAEPIGAPKKTYMDREFTLWDRIDVQGPLTLQEFIDNVQNQTGGCEVSMLSAGACLLFS 970
Query: 423 FFMPKAKRLERLNLPMSEVVTKVSKKKLEPHVNALVFELCCNDDDGNDVEVPYVKYT 253
FFM K+ ERL + V ++ KK L P V+ALV E +D DG DVEVPY++Y+
Sbjct: 971 FFMNAGKKQERLKTEVKAVYEELLKKSLHPSVHALVLEPMMSDPDGEDVEVPYIRYS 1027
>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
protein C47E12.5a protein.
Length = 1113
Score = 187 bits (455), Expect = 9e-48
Identities = 93/177 (52%), Positives = 125/177 (70%), Gaps = 5/177 (2%)
Frame = -3
Query: 768 DRHRXKLIAGKIIPAIATTTSVVAGLVCLELYKL--AQGFNK--LEVFKNGFVNLALPFF 601
DR R K IAGKIIPAIATTT+ VAGLVC+ELYK+ A G K +E FKN F+NL++PFF
Sbjct: 936 DRMRTKQIAGKIIPAIATTTAAVAGLVCIELYKVVDANGIPKTPMERFKNTFLNLSMPFF 995
Query: 600 GFSEPIAPSTNTYNENKWTLWDRFEVKGEITLQQFLDHFKNEHK-LEITMLSQGVCMLYS 424
+EPI TY + ++TLWDR +V+G +TLQ+F+D+ +N+ E++MLS G C+L+S
Sbjct: 996 SSAEPIGAPKKTYMDREFTLWDRIDVQGPLTLQEFIDNVQNQTGGCEVSMLSAGACLLFS 1055
Query: 423 FFMPKAKRLERLNLPMSEVVTKVSKKKLEPHVNALVFELCCNDDDGNDVEVPYVKYT 253
FFM K+ ERL + V ++ KK L P V+ALV E +D DG DVEVPY++Y+
Sbjct: 1056 FFMNAGKKQERLKTEVKAVYEELLKKSLHPSVHALVLEPMMSDPDGEDVEVPYIRYS 1112
>Z82062-5|CAB54319.4| 582|Caenorhabditis elegans Hypothetical
protein W02A11.4 protein.
Length = 582
Score = 37.1 bits (82), Expect = 0.014
Identities = 15/32 (46%), Positives = 24/32 (75%)
Frame = -3
Query: 753 KLIAGKIIPAIATTTSVVAGLVCLELYKLAQG 658
K +AG IIPAIA+T ++VAG++ E ++ +G
Sbjct: 367 KAMAGNIIPAIASTNAIVAGIIVTEAVRVIEG 398
>U40187-3|AAA81160.2| 430|Caenorhabditis elegans Ectopic membrane
ruffles in embryoprotein 1 protein.
Length = 430
Score = 32.7 bits (71), Expect = 0.30
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 3/135 (2%)
Frame = -3
Query: 768 DRHRXKLIAGKIIPAIATTTSVVAGLVCLELYKLAQGFNK-LEVFKNGFVNLALPFFGFS 592
DR + +IIPA+A+T +V+A LE KLA K ++ + N F + +
Sbjct: 271 DRRLTSGVLKRIIPAVASTNAVIAASCALEALKLATNIAKPIDNYLN-FTQIHGAYTSVV 329
Query: 591 EPIAPSTNTYNENKWTLWDRFEVKGEITLQQFLDHFKNEHKLEITMLSQGVCMLY--SFF 418
+ N + L FEV TL+ + L+ L+ LY S F
Sbjct: 330 S-MMKDDNCLTCSGGRL--PFEVSPSSTLESLIIRLSERFHLKHPTLATSTRKLYCISSF 386
Query: 417 MPKAKRLERLNLPMS 373
MP+ ++ + NL S
Sbjct: 387 MPQFEQESKENLHTS 401
>Z73905-4|CAI91175.1| 536|Caenorhabditis elegans Hypothetical
protein C32C4.7 protein.
Length = 536
Score = 30.3 bits (65), Expect = 1.6
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = -1
Query: 278 WRSRM*NTLCLSLFNVILSPPKVVQKNNSYH 186
++ R+ NT+C ++ V + PPK++ ++ Y+
Sbjct: 205 FQERLMNTVCAFIYQVFMKPPKMISYSHPYY 235
>AC006679-8|AAK84470.1| 630|Caenorhabditis elegans Hypothetical
protein R13A5.9 protein.
Length = 630
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -3
Query: 750 LIAGKIIPAIAT-TTSVVAGLVCLELYKLAQGFNKL 646
+I G +I I T TT V+ GL+CL + G NKL
Sbjct: 526 IIGGSVISIIGTRTTFVIYGLICLATCAGSFGLNKL 561
>Z81036-3|CAB02741.1| 357|Caenorhabditis elegans Hypothetical
protein C16C2.4 protein.
Length = 357
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 381 PMSEVVTKVSKKKLEPHVNALVFELCCNDDDGNDVEV 271
P S K KK+ EP V V E C D+D + E+
Sbjct: 261 PQSSSEIKEEKKENEPEVKETVSEESCEDEDEEEEEL 297
>AF125459-6|AAN60503.1| 219|Caenorhabditis elegans Hypothetical
protein Y25C1A.8b protein.
Length = 219
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +1
Query: 565 GIGRRRDRFRETEEGQGKVDEAI 633
G R+RD+FR+ EEG+ DE I
Sbjct: 9 GKRRKRDQFRDMEEGEASDDEEI 31
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -3
Query: 636 KNGFVNLALPFFGFSEPIAPSTN 568
KNG + + FFGFSE I+P N
Sbjct: 90 KNGVLKVRFFFFGFSEFISPEPN 112
>U97196-7|AAB52462.1| 141|Caenorhabditis elegans Hypothetical
protein B0207.8 protein.
Length = 141
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -3
Query: 639 FKNGFVNLALPFFGFSEPIAPSTNTYNENKWTLWDR 532
FKNGF + F F + +ENKW L R
Sbjct: 99 FKNGFCENTMKFVNFQNINRSTNEILDENKWHLMYR 134
>L25598-6|AAA27939.2| 886|Caenorhabditis elegans Hypothetical
protein C06G4.1 protein.
Length = 886
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 257 YFTYGTSTSFPSSSLQHNSKTNAFTCGSNFFLDTFVTTSDIGRFNRSS 400
YF G STS + +HN+++ T GSN + ++ S+I R + S
Sbjct: 73 YFP-GISTSLINVQREHNNRSKYDTWGSNSCSEPRISISNIERLEKPS 119
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,358,135
Number of Sequences: 27780
Number of extensions: 376815
Number of successful extensions: 1036
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1851132448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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