Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_C09
         (343 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0227 - 14485676-14487316                                         28   1.7  
11_04_0474 + 18162538-18163731,18163800-18163855,18163951-181640...    28   2.2  
06_03_0924 - 25976629-25976979,25977471-25978424,25978512-259785...    28   2.2  
11_06_0150 - 20640535-20640600,20641299-20641451,20641567-20641830     27   2.9  
10_08_0291 + 16556823-16557167,16557255-16557497,16557568-16558131     26   8.9  
07_03_0629 - 20076676-20080390,20080508-20080576,20081335-20081660     26   8.9  

>08_02_0227 - 14485676-14487316
          Length = 546

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +2

Query: 8   FVFGGRRF-LLRVVSDGRIELVLLVPVSLPWFRXWSSCSKIHQDYAKPDAEYRTQLHHI 181
           FVF G+   + R V + R+E  +  P         SS S     YA P  EY  +LHH+
Sbjct: 113 FVFHGKCVRMFRNVEELRLECQIDAPAGAG---PLSSSSPPRYTYAMPGPEYNLRLHHL 168


>11_04_0474 +
           18162538-18163731,18163800-18163855,18163951-18164011,
           18164107-18165495,18166024-18166635,18166706-18166852,
           18166941-18167209,18167322-18167412,18167500-18167757,
           18168376-18168450,18168937-18168945
          Length = 1386

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = +1

Query: 106 LVFLFQDTSGLRKARRRV*NTAPPHPIPTHTYRG 207
           L FL +DT G+  A RRV N A P+P    T  G
Sbjct: 671 LKFLNRDTGGVADANRRV-NFAEPNPSKDRTMGG 703


>06_03_0924 -
           25976629-25976979,25977471-25978424,25978512-25978565,
           25979135-25979254,25979357-25979532,25979624-25980107,
           25980541-25980744,25981671-25981877,25982179-25982271,
           25982433-25982621,25983364-25983423,25983591-25983927,
           25984195-25984432,25984614-25984816,25985549-25986554,
           25987125-25987290,25987715-25987824,25987944-25988195,
           25988360-25988402,25988488-25988550,25989512-25989624,
           25990787-25990838
          Length = 1824

 Score = 27.9 bits (59), Expect = 2.2
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +2

Query: 125 IHQDYAKPDAEYRTQLHHILSPHIHTEGSKPYASSNLRGSV 247
           I ++Y  P+ E  T+  H+LS   +   +  YAS N + SV
Sbjct: 105 IDEEYDGPEVEAATEEDHLLSKKDYFSSNAVYASVNSKVSV 145


>11_06_0150 - 20640535-20640600,20641299-20641451,20641567-20641830
          Length = 160

 Score = 27.5 bits (58), Expect = 2.9
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +1

Query: 127 TSGLRKARR-RV*NTAPPHPIPTHTYRG 207
           TS  R A+R R+    PP P PTH  RG
Sbjct: 3   TSAARAAKRARIAAPPPPTPTPTHLRRG 30


>10_08_0291 + 16556823-16557167,16557255-16557497,16557568-16558131
          Length = 383

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 179 ILSPHIHTEGSKPYASSNLRGSVL 250
           I+S H+  E + PY S +LRG+ L
Sbjct: 71  IISEHLGAEPTLPYLSPDLRGAKL 94


>07_03_0629 - 20076676-20080390,20080508-20080576,20081335-20081660
          Length = 1369

 Score = 25.8 bits (54), Expect = 8.9
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +1

Query: 64  TCTACSCKPPMVQGLVFLFQDTSGLRKARRRV*NTAPPHPIPTHTYRGIKA 216
           T  ACS K     G   +  +     +ARRR  +T PP P P    R + +
Sbjct: 42  THAACSTKCAGKTGADHMSHEIEEKVRARRRRRSTPPPRPRPCREARELNS 92


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,110,882
Number of Sequences: 37544
Number of extensions: 204948
Number of successful extensions: 490
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 489
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 482105440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)