Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_B22
         (739 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0674 - 21745321-21746223,21746229-21747608                       33   0.18 
12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232           30   1.7  
06_01_1181 + 10148653-10149405                                         30   2.2  
12_02_0168 + 14827529-14828050                                         29   5.1  
08_02_0058 + 11773402-11773482,11773513-11774197,11774245-11774714     28   6.7  
03_02_0232 + 6614784-6614882,6616145-6616477,6616708-6616967,661...    28   6.7  
03_03_0226 + 15590276-15590469,15590515-15590539,15590865-155910...    28   8.9  

>12_02_0674 - 21745321-21746223,21746229-21747608
          Length = 760

 Score = 33.5 bits (73), Expect = 0.18
 Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
 Frame = -2

Query: 681 TTTLSLPXRGLRYPATVTCLSIA--RXTATPRALSMPTTTLALSIITGQSTTCQDACDVE 508
           T  LS P   +   A+   LS A  +  +TPR   + T T   S I     T   +    
Sbjct: 498 TGELSTPTSQIPSTASTRELSTATGKIPSTPRTNPLSTAT---SKIPSTPRTSLLSSSTS 554

Query: 507 LIPSTPTRHGRTISTGWLPSTGCT 436
            IPSTP+    + +TG +PST CT
Sbjct: 555 KIPSTPSTCELSTATGKIPSTTCT 578


>12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232
          Length = 1035

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
 Frame = -1

Query: 535 HVPRRVRRGVDPFDAHKAWQDHLDRLAAIDRLYPSR--YGLYLKDRAYPITDLTAPLIDP 362
           +V R   R +D   A ++   HL+R   +DRLYPS+   G  L   AY     ++ L+  
Sbjct: 314 YVERSREREIDRLYAGRSL--HLERDGEMDRLYPSKGVLGADLAPSAY--AGSSSSLLAK 369

Query: 361 LKPKSL-KGIEYEPDN 317
            +P  L  G  YEP N
Sbjct: 370 ERPYRLHDGTSYEPTN 385


>06_01_1181 + 10148653-10149405
          Length = 250

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -1

Query: 637 YRYLPVHREXYGYSPRPIYAHNYPRSXDYYRPIYHVPRRVRRG 509
           +RY+ VH   Y     P+  + YP +     P  HV   VR G
Sbjct: 155 FRYVQVHHPVYAAPGEPVQGYGYPVAMSSALPAPHVHVGVRGG 197


>12_02_0168 + 14827529-14828050
          Length = 173

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +1

Query: 436 GTAGRWQPACRDGPAMPCGRRR 501
           G AGRW+  CR G + P GRRR
Sbjct: 22  GGAGRWR--CRSGRSAPGGRRR 41


>08_02_0058 + 11773402-11773482,11773513-11774197,11774245-11774714
          Length = 411

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +2

Query: 449 DGSQPVEMVLPCLVGVEGINSTSHASWHVVDW 544
           D    V  V  C++ + G+  T++ +W +V+W
Sbjct: 279 DNGLMVSRVESCVIKLPGVMGTANETWSIVEW 310


>03_02_0232 +
           6614784-6614882,6616145-6616477,6616708-6616967,
           6617328-6617469,6617567-6617938,6618056-6618187,
           6618907-6619035,6619125-6621188
          Length = 1176

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 139 IHKDFPQDLKDCCY 98
           + KDFPQD   CCY
Sbjct: 635 LRKDFPQDQSSCCY 648


>03_03_0226 +
           15590276-15590469,15590515-15590539,15590865-15591014,
           15591166-15591594
          Length = 265

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 585 SMPTTTLALSIITGQSTTCQDACDVELIPSTPTRHGRTISTGW 457
           S  T+TL+  + T   ++  D   + L P+T T  GR  +T W
Sbjct: 209 SPTTSTLSGRVTTTAWSSTSDVAFLPLPPTTSTLSGRVTTTAW 251


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,523,909
Number of Sequences: 37544
Number of extensions: 348153
Number of successful extensions: 1085
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1081
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)