BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_B22
(739 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070234-1|AAL58538.1| 223|Anopheles gambiae glutathione S-tran... 25 3.2
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 24 4.3
AY496420-1|AAS80137.1| 447|Anopheles gambiae bacteria responsiv... 24 5.6
AJ007394-1|CAA07489.1| 112|Anopheles gambiae mucin protein. 24 5.6
CR954257-8|CAJ14159.1| 562|Anopheles gambiae putative esterase ... 23 9.8
>AY070234-1|AAL58538.1| 223|Anopheles gambiae glutathione
S-transferase E3 protein.
Length = 223
Score = 24.6 bits (51), Expect = 3.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 544 PIYHVPRRVRRGVDPFDAHKAWQDHLDRLAAIDRLYPSR 428
P++ VP GV +D+H + + A D LYP++
Sbjct: 51 PMHTVPTVNDNGVPLYDSHAIINYLVQKYAKDDTLYPAK 89
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 24.2 bits (50), Expect = 4.3
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -3
Query: 569 PSLXRLLQANLPRAKTRATWS*SLRRPQGMAGPSRQAGCHRPAVP 435
P L + A+LP + R S+ AGP G HR AVP
Sbjct: 1401 PKLIQQPMADLPEQRVRQARPFSISGVD-YAGPIMVKGTHRRAVP 1444
>AY496420-1|AAS80137.1| 447|Anopheles gambiae bacteria responsive
protein 1 protein.
Length = 447
Score = 23.8 bits (49), Expect = 5.6
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 568 PRSXDYYRPIYHVPRRVRRGVDPFDAHKAW 479
P+ DY PIY RV G + D KAW
Sbjct: 262 PKEGDYTAPIYEPTERV-VGNNVDDKVKAW 290
>AJ007394-1|CAA07489.1| 112|Anopheles gambiae mucin protein.
Length = 112
Score = 23.8 bits (49), Expect = 5.6
Identities = 21/68 (30%), Positives = 30/68 (44%)
Frame = -2
Query: 702 TLTPSRFTTTLSLPXRGLRYPATVTCLSIARXTATPRALSMPTTTLALSIITGQSTTCQD 523
T T + TTT++ P T T ++ + T T A S P TT + T S+ QD
Sbjct: 33 TTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVA-SGPVTTTGSTDTTTPSSAPQD 91
Query: 522 ACDVELIP 499
L+P
Sbjct: 92 V-KAALVP 98
>CR954257-8|CAJ14159.1| 562|Anopheles gambiae putative esterase
protein.
Length = 562
Score = 23.0 bits (47), Expect = 9.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 516 DVELIPSTPTRHGRTIS 466
D+ + P PT H RT+S
Sbjct: 468 DLTISPILPTNHARTVS 484
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,752
Number of Sequences: 2352
Number of extensions: 13302
Number of successful extensions: 34
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -