Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_B22
(739 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 33 1.4
L46721-1|AAC41774.1| 164|Homo sapiens mucin protein. 32 2.5
U78550-1|AAC51342.1| 328|Homo sapiens mucin MUC5B protein. 31 3.3
BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein. 31 3.3
AK097855-1|BAC05184.1| 180|Homo sapiens protein ( Homo sapiens ... 31 3.3
AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17 pr... 31 3.3
AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17 pr... 31 3.3
AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane muc... 31 3.3
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 31 4.3
AF152478-1|AAD43739.1| 807|Homo sapiens protocadherin alpha 13 ... 31 5.7
AF152309-1|AAD43703.1| 950|Homo sapiens protocadherin alpha 13 ... 31 5.7
AC005609-1|AAC34314.1| 807|Homo sapiens KIAA0345-like 1 protein. 31 5.7
AB208924-1|BAD92161.1| 921|Homo sapiens protocadherin alpha 13 ... 31 5.7
CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein. 30 7.5
BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein. 30 7.5
Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. 30 10.0
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 30 10.0
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 32.7 bits (71), Expect = 1.4
Identities = 27/131 (20%), Positives = 37/131 (28%)
Frame = -2
Query: 702 TLTPSRFTTTLSLPXRGLRYPATVTCLSIARXTATPRALSMPTTTLALSIITGQSTTCQD 523
T P+ TT S+P + T T+ P + T S STT
Sbjct: 649 TSAPTTSTTPASIPSTTSAPTTSTTSAPTTSTTSAPTTSTTSTPQTTTSSAPTSSTTSAP 708
Query: 522 ACDVELIPSTPTRHGRTISTGWLPSTGCTHLATDSXXXXXXXXXXXXXXXXXXXXXLRV* 343
P+T T T ST P+ T T +
Sbjct: 709 TTSTISAPTTSTISAPTTSTTSAPTASTTSAPTSTSSAPTTNTTSAPTTSTTSAPITSTI 768
Query: 342 KASNMSRTTSP 310
A S T++P
Sbjct: 769 SAPTTSTTSTP 779
Score = 31.9 bits (69), Expect = 2.5
Identities = 32/129 (24%), Positives = 41/129 (31%), Gaps = 4/129 (3%)
Frame = -2
Query: 681 TTTLSLPXRGLRYPATVTCLSIARXTA---TPRALSMPTTTLALSIITGQSTTCQDACDV 511
T+T+S P T + S T+ T S PTT+ + IT ST
Sbjct: 718 TSTISAPTTSTTSAPTASTTSAPTSTSSAPTTNTTSAPTTSTTSAPIT--STISAPTTST 775
Query: 510 ELIPSTPTRHGRTISTGWLPSTGCTHLATDSXXXX-XXXXXXXXXXXXXXXXXLRV*KAS 334
P T T T ST P T T T S + A
Sbjct: 776 TSTPQTSTISSPTTSTTPTPQTSTTSSPTTSTTSAPTTSTTSAPTTSTTSTPQTSISSAP 835
Query: 333 NMSRTTSPT 307
S T++PT
Sbjct: 836 TSSTTSAPT 844
Score = 31.9 bits (69), Expect = 2.5
Identities = 25/108 (23%), Positives = 36/108 (33%)
Frame = -2
Query: 606 TATPRALSMPTTTLALSIITGQSTTCQDACDVELIPSTPTRHGRTISTGWLPSTGCTHLA 427
T+ P ++P +T + + STT P+ T G T ST P+T T
Sbjct: 1082 TSAPTTSTIPASTPSTTSAPTTSTTSAPTTSTTSAPTHRTTSGPTTSTTLAPTTSTTSAP 1141
Query: 426 TDSXXXXXXXXXXXXXXXXXXXXXLRV*KASNMSRTTSPTGEQPRLTK 283
T S S +S TS T P+ +K
Sbjct: 1142 TTSTNSAPTTSTISASTTSTISAPT----TSTISSPTSSTTSTPQTSK 1185
Score = 31.5 bits (68), Expect = 3.3
Identities = 32/135 (23%), Positives = 48/135 (35%), Gaps = 3/135 (2%)
Frame = -2
Query: 702 TLTPSRFTTTLSLPXRGLRYPATVTCLSIARXTATPRALSMPTTTLALSIITG--QSTTC 529
++T + T+T S P PA++ + A T+T A + TT+ + T Q+TT
Sbjct: 639 SITSTTQTSTTSAPTTSTT-PASIPSTTSAPTTSTTSAPTTSTTSAPTTSTTSTPQTTTS 697
Query: 528 Q-DACDVELIPSTPTRHGRTISTGWLPSTGCTHLATDSXXXXXXXXXXXXXXXXXXXXXL 352
P+T T T ST P+T T T S
Sbjct: 698 SAPTSSTTSAPTTSTISAPTTSTISAPTTSTTSAPTASTTSAPTSTSSAPTTNTTSAPTT 757
Query: 351 RV*KASNMSRTTSPT 307
A S ++PT
Sbjct: 758 STTSAPITSTISAPT 772
Score = 31.1 bits (67), Expect = 4.3
Identities = 29/129 (22%), Positives = 42/129 (32%), Gaps = 1/129 (0%)
Frame = -2
Query: 690 SRFTTTLSLPXRGLRYPATVTCLSIARXTAT-PRALSMPTTTLALSIITGQSTTCQDACD 514
SR TT ++ +T + + + A+ P S PTT+ + T STT
Sbjct: 630 SRTTTLVTSSITSTTQTSTTSAPTTSTTPASIPSTTSAPTTSTTSAPTT--STTSAPTTS 687
Query: 513 VELIPSTPTRHGRTISTGWLPSTGCTHLATDSXXXXXXXXXXXXXXXXXXXXXLRV*KAS 334
P T T T ST P+T T S A
Sbjct: 688 TTSTPQTTTSSAPTSSTTSAPTTSTISAPTTSTISAPTTSTTSAPTASTTSAPTSTSSAP 747
Query: 333 NMSRTTSPT 307
+ T++PT
Sbjct: 748 TTNTTSAPT 756
Score = 31.1 bits (67), Expect = 4.3
Identities = 29/135 (21%), Positives = 42/135 (31%), Gaps = 2/135 (1%)
Frame = -2
Query: 681 TTTLSLPXRGLRYPATVTCLSI--ARXTATPRALSMPTTTLALSIITGQSTTCQDACDVE 508
T T S P + +S T+TP+ ++ + T + + STT
Sbjct: 749 TNTTSAPTTSTTSAPITSTISAPTTSTTSTPQTSTISSPTTSTTPTPQTSTTSSPTTSTT 808
Query: 507 LIPSTPTRHGRTISTGWLPSTGCTHLATDSXXXXXXXXXXXXXXXXXXXXXLRV*KASNM 328
P+T T T ST P T + T S S
Sbjct: 809 SAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTASTISAPTTSTTSFHT----TSTT 864
Query: 327 SRTTSPTGEQPRLTK 283
S TS T P+ +K
Sbjct: 865 SPPTSSTSSTPQTSK 879
Score = 30.7 bits (66), Expect = 5.7
Identities = 28/97 (28%), Positives = 35/97 (36%), Gaps = 2/97 (2%)
Frame = -2
Query: 702 TLTPSRFTTTLSLPXRGLRYPATVTCLSIARXTATP--RALSMPTTTLALSIITGQSTTC 529
T P+ T S P + T T+ P R S PTT+ L+ T STT
Sbjct: 1082 TSAPTTSTIPASTPSTTSAPTTSTTSAPTTSTTSAPTHRTTSGPTTSTTLAPTT--STTS 1139
Query: 528 QDACDVELIPSTPTRHGRTISTGWLPSTGCTHLATDS 418
P+T T T ST P+T T S
Sbjct: 1140 APTTSTNSAPTTSTISASTTSTISAPTTSTISSPTSS 1176
>L46721-1|AAC41774.1| 164|Homo sapiens mucin protein.
Length = 164
Score = 31.9 bits (69), Expect = 2.5
Identities = 26/93 (27%), Positives = 33/93 (35%)
Frame = -2
Query: 696 TPSRFTTTLSLPXRGLRYPATVTCLSIARXTATPRALSMPTTTLALSIITGQSTTCQDAC 517
TPS TT S+ + T S T+ P P T + + STT
Sbjct: 6 TPSPVPTTSSISV----LTTSTTSASTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSAPTT 61
Query: 516 DVELIPSTPTRHGRTISTGWLPSTGCTHLATDS 418
P+T T T ST P+T T T S
Sbjct: 62 STTSAPTTSTPSAPTTSTTLAPTTSTTSAPTTS 94
Score = 31.1 bits (67), Expect = 4.3
Identities = 29/96 (30%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Frame = -2
Query: 696 TPSRFTTTLSLPXRGLRYPATVTCLSIARXTATPRALSMPTTTLALSIITGQ---STTCQ 526
T + T+T S P A T ++A T+T A + TT+ S T STT
Sbjct: 56 TSAPTTSTTSAPTTSTP-SAPTTSTTLAPTTSTTSAPTTSTTSTPTSSTTSTPQTSTTSA 114
Query: 525 DACDVELIPSTPTRHGRTISTGWLPSTGCTHLATDS 418
+ P T T ST P+T T AT S
Sbjct: 115 STTSITCGPGTTPSPVPTTSTTSAPTTSTTSAATTS 150
Score = 30.7 bits (66), Expect = 5.7
Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 3/100 (3%)
Frame = -2
Query: 714 SCRXTLTPSRFTTTLSL-PXRGLRYPATVTCLSI--ARXTATPRALSMPTTTLALSIITG 544
S T TPS TT+ +L P T + S + T+TP+ + +T +++ G
Sbjct: 65 SAPTTSTPSAPTTSTTLAPTTSTTSAPTTSTTSTPTSSTTSTPQTSTTSASTTSITCGPG 124
Query: 543 QSTTCQDACDVELIPSTPTRHGRTISTGWLPSTGCTHLAT 424
+ + P+T T T ST P+T T T
Sbjct: 125 TTPSPVPTTSTTSAPTTSTTSAATTSTISAPTTSTTSAPT 164
>U78550-1|AAC51342.1| 328|Homo sapiens mucin MUC5B protein.
Length = 328
Score = 31.5 bits (68), Expect = 3.3
Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Frame = -2
Query: 720 PNSCRXTL-TPSRFTTTLSLPXRGLRYPATVTCLSIARXTATPRALSMPTTTLAL-SIIT 547
P+S T TP + +T + P +TVT SI T TP L+ TTT+A S+ T
Sbjct: 184 PSSSPGTARTPPVWISTTTTPTTS---GSTVTPSSIPGTTHTPTVLTTTTTTVATGSMAT 240
Query: 546 GQSTTCQDACDVELI--PSTPTRHGRTISTGWLPST 445
S+T LI +T T G T + P T
Sbjct: 241 PSSSTQTSGTPPSLITTATTITATGSTTNPSSTPGT 276
>BC126315-1|AAI26316.1| 1224|Homo sapiens MUC17 protein protein.
Length = 1224
Score = 31.5 bits (68), Expect = 3.3
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = -2
Query: 714 SCRXTLTPSRFTTTLSLPXRGLRYPATVTCLSIARXTATPRALSMPTTTLALSI-ITGQS 538
S + T + F+TT + A +T ++++ +TPR S TT A ++ T
Sbjct: 706 STSSSSTTTSFSTTKEFTTPAMTTAAPLTYVTMSTAPSTPRTTSRGCTTSASTLSATSTP 765
Query: 537 TTCQDACDVELIPSTPTRHGRTISTGWLPST 445
T + PS+ + TI++ +P T
Sbjct: 766 HTSTSVTTRPVTPSSESSRPSTITSHTIPPT 796
>AK097855-1|BAC05184.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ40536 fis, clone TESTI2047930. ).
Length = 180
Score = 31.5 bits (68), Expect = 3.3
Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 4/81 (4%)
Frame = -3
Query: 635 PLPACPSRDXRLLPAPYLCPQLPSLXRLLQANLPRAKTRATWS*SLRRPQGMA----GPS 468
P +CP+ RL P PY P SL P A+ A R P+GMA GP
Sbjct: 69 PPDSCPAFAQRLTPDPYRPPSAVSLPP-YNDGAPWARATAPHPAPSRLPEGMAPGPTGPG 127
Query: 467 RQAGCHRPAVPISLRTLPKGP 405
AG I + + PK P
Sbjct: 128 EVAGYTAFRSKIQVCSDPKSP 148
>AJ606308-1|CAE54436.1| 4262|Homo sapiens secreted mucin MUC17
protein.
Length = 4262
Score = 31.5 bits (68), Expect = 3.3
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = -2
Query: 714 SCRXTLTPSRFTTTLSLPXRGLRYPATVTCLSIARXTATPRALSMPTTTLALSI-ITGQS 538
S + T + F+TT + A +T ++++ +TPR S TT A ++ T
Sbjct: 3975 STSSSSTTTSFSTTKEFTTPAMTTAAPLTYVTMSTAPSTPRTTSRGCTTSASTLSATSTP 4034
Query: 537 TTCQDACDVELIPSTPTRHGRTISTGWLPST 445
T + PS+ + TI++ +P T
Sbjct: 4035 HTSTSVTTRPVTPSSESSRPSTITSHTIPPT 4065
>AJ606307-1|CAE54435.1| 4493|Homo sapiens membrane mucin MUC17
protein.
Length = 4493
Score = 31.5 bits (68), Expect = 3.3
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = -2
Query: 714 SCRXTLTPSRFTTTLSLPXRGLRYPATVTCLSIARXTATPRALSMPTTTLALSI-ITGQS 538
S + T + F+TT + A +T ++++ +TPR S TT A ++ T
Sbjct: 3975 STSSSSTTTSFSTTKEFTTPAMTTAAPLTYVTMSTAPSTPRTTSRGCTTSASTLSATSTP 4034
Query: 537 TTCQDACDVELIPSTPTRHGRTISTGWLPST 445
T + PS+ + TI++ +P T
Sbjct: 4035 HTSTSVTTRPVTPSSESSRPSTITSHTIPPT 4065
>AF430017-1|AAL89737.1| 1029|Homo sapiens intestinal membrane mucin
MUC17 protein.
Length = 1029
Score = 31.5 bits (68), Expect = 3.3
Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = -2
Query: 714 SCRXTLTPSRFTTTLSLPXRGLRYPATVTCLSIARXTATPRALSMPTTTLALSI-ITGQS 538
S + T + F+TT + A +T ++++ +TPR S TT A ++ T
Sbjct: 511 STSSSSTTTSFSTTKEFTTPAMTTAAPLTYVTMSTAPSTPRTTSRGCTTSASTLSATSTP 570
Query: 537 TTCQDACDVELIPSTPTRHGRTISTGWLPST 445
T + PS+ + TI++ +P T
Sbjct: 571 HTSTSVTTRPVTPSSESSRPSTITSHTIPPT 601
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 31.1 bits (67), Expect = 4.3
Identities = 26/82 (31%), Positives = 37/82 (45%)
Frame = -2
Query: 708 RXTLTPSRFTTTLSLPXRGLRYPATVTCLSIARXTATPRALSMPTTTLALSIITGQSTTC 529
R P +TT + RG +TVT SI T TP L+ TTT+A + S++
Sbjct: 744 RARTLPVWISTTTTPTTRG----STVTPSSIPGTTHTPTVLTTTTTTVATGSMATPSSST 799
Query: 528 QDACDVELIPSTPTRHGRTIST 463
Q + + +T T T ST
Sbjct: 800 QTSGTPPSLTTTATTITATGST 821
Score = 30.7 bits (66), Expect = 5.7
Identities = 29/106 (27%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Frame = -2
Query: 720 PNSCRXTLTPSRFTTTLSLPXRGLRYPATVTCLSIARXTATPRALSMPTTTLALSIITGQ 541
P + T TPS T+ T S+A ++TP TT + + TG
Sbjct: 1904 PTATMSTATPSSTPETVHTSTVLTTTATTTRTGSVATPSSTPGTAH--TTKVPTTTTTGF 1961
Query: 540 STTCQDACDVELIP-------STPTRHGRTISTGWLPSTGCTHLAT 424
+ T + L P +TPT G T++ +P G TH AT
Sbjct: 1962 TATPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIP--GTTHTAT 2005
Score = 29.9 bits (64), Expect = 10.0
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = -2
Query: 720 PNSCRXT-LTPSRFTTTLSLPXRGLRYPA--TVTCLSIARXTATPRALSMPTTTLALSII 550
P+S T LTP + +T + P + TVT SI T T R L+ TTT+A +
Sbjct: 3221 PSSSPGTALTPPVWISTTTTPTTTTPTTSGSTVTPSSIPGTTHTARVLTTTTTTVATGSM 3280
Query: 549 TGQSTTCQDACDVELIPSTPTRHGRTIST 463
S++ Q + + +T T T ST
Sbjct: 3281 ATPSSSTQTSGTPPSLTTTATTITATGST 3309
>AF152478-1|AAD43739.1| 807|Homo sapiens protocadherin alpha 13
short form protein protein.
Length = 807
Score = 30.7 bits (66), Expect = 5.7
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 535 HVPRRVRRGVDPFDAHKAWQDHLDRLAAIDRLYPSRYGLYLKD--RAYPITDLTAP 374
HV +VR VD + AW + +LAA+ P R GLY + P+ ++ AP
Sbjct: 589 HVVAKVR-AVDADSGYNAWLSYELQLAAVGARIPFRVGLYTGEISTTRPLDEVDAP 643
>AF152309-1|AAD43703.1| 950|Homo sapiens protocadherin alpha 13
protein.
Length = 950
Score = 30.7 bits (66), Expect = 5.7
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 535 HVPRRVRRGVDPFDAHKAWQDHLDRLAAIDRLYPSRYGLYLKD--RAYPITDLTAP 374
HV +VR VD + AW + +LAA+ P R GLY + P+ ++ AP
Sbjct: 589 HVVAKVR-AVDADSGYNAWLSYELQLAAVGARIPFRVGLYTGEISTTRPLDEVDAP 643
>AC005609-1|AAC34314.1| 807|Homo sapiens KIAA0345-like 1 protein.
Length = 807
Score = 30.7 bits (66), Expect = 5.7
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 535 HVPRRVRRGVDPFDAHKAWQDHLDRLAAIDRLYPSRYGLYLKD--RAYPITDLTAP 374
HV +VR VD + AW + +LAA+ P R GLY + P+ ++ AP
Sbjct: 589 HVVAKVR-AVDADSGYNAWLSYELQLAAVGARIPFRVGLYTGEISTTRPLDEVDAP 643
>AB208924-1|BAD92161.1| 921|Homo sapiens protocadherin alpha 13
isoform 1 precursor variant protein.
Length = 921
Score = 30.7 bits (66), Expect = 5.7
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 535 HVPRRVRRGVDPFDAHKAWQDHLDRLAAIDRLYPSRYGLYLKD--RAYPITDLTAP 374
HV +VR VD + AW + +LAA+ P R GLY + P+ ++ AP
Sbjct: 606 HVVAKVR-AVDADSGYNAWLSYELQLAAVGARIPFRVGLYTGEISTTRPLDEVDAP 660
>CR457114-1|CAG33395.1| 364|Homo sapiens HAVCR1 protein.
Length = 364
Score = 30.3 bits (65), Expect = 7.5
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -2
Query: 708 RXTLTPSRFTT-TLSLPXRGLRYPATVTC-LSIARXTATPRALSMPTTTLALSIITGQST 535
+ T TP T T++ P T T ++ T P +S+PTTT L+ +T +T
Sbjct: 128 KVTTTPIVTTVPTVTTVRTSTTVPTTTTVPMTTVPTTTVPTTMSIPTTTTVLTTMTVSTT 187
Query: 534 T 532
T
Sbjct: 188 T 188
>BC013325-1|AAH13325.1| 364|Homo sapiens HAVCR1 protein protein.
Length = 364
Score = 30.3 bits (65), Expect = 7.5
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = -2
Query: 708 RXTLTPSRFTT-TLSLPXRGLRYPATVTC-LSIARXTATPRALSMPTTTLALSIITGQST 535
+ T TP T T++ P T T ++ T P +S+PTTT L+ +T +T
Sbjct: 128 KVTTTPIVTTVPTVTTVRTSTTVPTTTTVPMTTVPTTTVPTTMSIPTTTTVLTTMTVSTT 187
Query: 534 T 532
T
Sbjct: 188 T 188
>Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein.
Length = 279
Score = 29.9 bits (64), Expect = 10.0
Identities = 32/129 (24%), Positives = 44/129 (34%)
Frame = -2
Query: 693 PSRFTTTLSLPXRGLRYPATVTCLSIARXTATPRALSMPTTTLALSIITGQSTTCQDACD 514
PS TT+ + P T + A T T A TT+ A + STT
Sbjct: 1 PSAPTTSTTSGPGTTPSPVPTTSTTSAPTTRTTSAPKSSTTSAATT-----STTSGPETT 55
Query: 513 VELIPSTPTRHGRTISTGWLPSTGCTHLATDSXXXXXXXXXXXXXXXXXXXXXLRV*KAS 334
+P+T T T ST P+T T +T S ++
Sbjct: 56 PRPVPTTSTTSSPTTSTTSAPTTSTTSASTTSTTSGAGTTPSPVPTTSTTSAPTTRTTSA 115
Query: 333 NMSRTTSPT 307
+S TTS T
Sbjct: 116 PISSTTSAT 124
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 29.9 bits (64), Expect = 10.0
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = -2
Query: 720 PNSCRXT-LTPSRFTTTLSLPXRGLRYPA--TVTCLSIARXTATPRALSMPTTTLALSII 550
P+S T LTP + +T + P + TVT SI T T R L+ TTT+A +
Sbjct: 436 PSSSPGTALTPPVWISTTTTPTTTTPTTSGSTVTPSSIPGTTHTARVLTTTTTTVATGSM 495
Query: 549 TGQSTTCQDACDVELIPSTPTRHGRTIST 463
S++ Q + + +T T T ST
Sbjct: 496 ATPSSSTQTSGTPPSLTTTATTITATGST 524
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,788,471
Number of Sequences: 237096
Number of extensions: 1825905
Number of successful extensions: 8829
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8787
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -