Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_B14
(631 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL162431-5|CAH74092.1| 811|Homo sapiens KIAA1614 protein. 32 1.5
AL162431-4|CAH74091.1| 1190|Homo sapiens KIAA1614 protein. 32 1.5
AB046834-1|BAB13440.1| 1208|Homo sapiens KIAA1614 protein protein. 32 1.5
AL832450-1|CAD38626.1| 217|Homo sapiens hypothetical protein pr... 31 3.4
CR541837-1|CAG46636.1| 276|Homo sapiens COX11 protein. 30 5.9
BC005895-1|AAH05895.1| 276|Homo sapiens COX11 homolog, cytochro... 30 5.9
AF044321-1|AAD08645.1| 276|Homo sapiens cytochrome c oxidase as... 30 5.9
BC113377-1|AAI13378.1| 1043|Homo sapiens F-box protein, helicase... 30 7.8
BC113375-1|AAI13376.1| 1043|Homo sapiens F-box protein, helicase... 30 7.8
AL137186-6|CAI41074.1| 1094|Homo sapiens F-box protein, helicase... 30 7.8
AL137186-5|CAI41073.1| 1043|Homo sapiens F-box protein, helicase... 30 7.8
AK095343-1|BAC04535.1| 1043|Homo sapiens protein ( Homo sapiens ... 30 7.8
AF456237-1|AAP97705.1| 1043|Homo sapiens testis protein protein. 30 7.8
AF454502-1|AAP97700.1| 1042|Homo sapiens hypothetical protein pr... 30 7.8
>AL162431-5|CAH74092.1| 811|Homo sapiens KIAA1614 protein.
Length = 811
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2
Query: 285 QGCRAHRRSSADDPRSGCYDRGLRSSGPVRQRAVVPQRGGHRPRQATLPA 136
QG R RS A DPR+ R +G + GGHRPR+ P+
Sbjct: 20 QGSRDGHRSPARDPRTTPACRDSLQNGHTSDSSSGESSGGHRPRRGPSPS 69
>AL162431-4|CAH74091.1| 1190|Homo sapiens KIAA1614 protein.
Length = 1190
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2
Query: 285 QGCRAHRRSSADDPRSGCYDRGLRSSGPVRQRAVVPQRGGHRPRQATLPA 136
QG R RS A DPR+ R +G + GGHRPR+ P+
Sbjct: 399 QGSRDGHRSPARDPRTTPACRDSLQNGHTSDSSSGESSGGHRPRRGPSPS 448
>AB046834-1|BAB13440.1| 1208|Homo sapiens KIAA1614 protein protein.
Length = 1208
Score = 32.3 bits (70), Expect = 1.5
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -2
Query: 285 QGCRAHRRSSADDPRSGCYDRGLRSSGPVRQRAVVPQRGGHRPRQATLPA 136
QG R RS A DPR+ R +G + GGHRPR+ P+
Sbjct: 417 QGSRDGHRSPARDPRTTPACRDSLQNGHTSDSSSGESSGGHRPRRGPSPS 466
>AL832450-1|CAD38626.1| 217|Homo sapiens hypothetical protein
protein.
Length = 217
Score = 31.1 bits (67), Expect = 3.4
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = -2
Query: 300 ELPGRQGCRAHRRSSADDPRSGCYDRGLRSSGPVRQRAVVPQRGGHR 160
++ +G R R S+ ++G +R R+SGP R + QR GHR
Sbjct: 122 QMVSERGARG-RGSTGRPGKAGVRERTRRASGPGRSPGSIAQRAGHR 167
>CR541837-1|CAG46636.1| 276|Homo sapiens COX11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 5.9
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +2
Query: 104 EPFAV*PWL*TAGR---VAWRGRWPPRCGTTARWRTGPLERKPRS*HPDLGSSADERR 268
EPF W T G + W G W RC AR R+P+S +P + +ERR
Sbjct: 33 EPFLRPEWSGTGGAERGLRWLGTWK-RCSLRARHPALQPPRRPKSSNPFTRAQEEERR 89
>BC005895-1|AAH05895.1| 276|Homo sapiens COX11 homolog, cytochrome
c oxidase assembly protein (yeast) protein.
Length = 276
Score = 30.3 bits (65), Expect = 5.9
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +2
Query: 104 EPFAV*PWL*TAGR---VAWRGRWPPRCGTTARWRTGPLERKPRS*HPDLGSSADERR 268
EPF W T G + W G W RC AR R+P+S +P + +ERR
Sbjct: 33 EPFLRPEWSGTGGAERGLRWLGTWK-RCSLRARHPALQPPRRPKSSNPFTRAQEEERR 89
>AF044321-1|AAD08645.1| 276|Homo sapiens cytochrome c oxidase
assembly protein COX11 protein.
Length = 276
Score = 30.3 bits (65), Expect = 5.9
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +2
Query: 104 EPFAV*PWL*TAGR---VAWRGRWPPRCGTTARWRTGPLERKPRS*HPDLGSSADERR 268
EPF W T G + W G W RC AR R+P+S +P + +ERR
Sbjct: 33 EPFLRPEWSGTGGAERGLRWLGTWK-RCSLRARHPALQPPRRPKSSNPFTRAQEEERR 89
>BC113377-1|AAI13378.1| 1043|Homo sapiens F-box protein, helicase,
18 protein.
Length = 1043
Score = 29.9 bits (64), Expect = 7.8
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = -2
Query: 342 RRGALPQGSFRQAPE--LPGRQGCRAHRRSSADDPRSGCYDRGLRSSGPVRQRAVVPQRG 169
+RG+ QGS R PE L G+Q C S + C D P +PQ G
Sbjct: 48 KRGSRGQGSQRCIPEFFLAGKQPCTNDMAKSNSVGQDSCQDSEGDMIFPAESSCALPQEG 107
Query: 168 GHRP 157
P
Sbjct: 108 SAGP 111
>BC113375-1|AAI13376.1| 1043|Homo sapiens F-box protein, helicase,
18 protein.
Length = 1043
Score = 29.9 bits (64), Expect = 7.8
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = -2
Query: 342 RRGALPQGSFRQAPE--LPGRQGCRAHRRSSADDPRSGCYDRGLRSSGPVRQRAVVPQRG 169
+RG+ QGS R PE L G+Q C S + C D P +PQ G
Sbjct: 48 KRGSRGQGSQRCIPEFFLAGKQPCTNDMAKSNSVGQDSCQDSEGDMIFPAESSCALPQEG 107
Query: 168 GHRP 157
P
Sbjct: 108 SAGP 111
>AL137186-6|CAI41074.1| 1094|Homo sapiens F-box protein, helicase,
18 protein.
Length = 1094
Score = 29.9 bits (64), Expect = 7.8
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = -2
Query: 342 RRGALPQGSFRQAPE--LPGRQGCRAHRRSSADDPRSGCYDRGLRSSGPVRQRAVVPQRG 169
+RG+ QGS R PE L G+Q C S + C D P +PQ G
Sbjct: 99 KRGSRGQGSQRCIPEFFLAGKQPCTNDMAKSNSVGQDSCQDSEGDMIFPAESSCALPQEG 158
Query: 168 GHRP 157
P
Sbjct: 159 SAGP 162
>AL137186-5|CAI41073.1| 1043|Homo sapiens F-box protein, helicase,
18 protein.
Length = 1043
Score = 29.9 bits (64), Expect = 7.8
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = -2
Query: 342 RRGALPQGSFRQAPE--LPGRQGCRAHRRSSADDPRSGCYDRGLRSSGPVRQRAVVPQRG 169
+RG+ QGS R PE L G+Q C S + C D P +PQ G
Sbjct: 48 KRGSRGQGSQRCIPEFFLAGKQPCTNDMAKSNSVGQDSCQDSEGDMIFPAESSCALPQEG 107
Query: 168 GHRP 157
P
Sbjct: 108 SAGP 111
>AK095343-1|BAC04535.1| 1043|Homo sapiens protein ( Homo sapiens
cDNA FLJ38024 fis, clone CTONG2012996, highly similar to
Mus musculus F-box protein FBX18 mRNA. ).
Length = 1043
Score = 29.9 bits (64), Expect = 7.8
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = -2
Query: 342 RRGALPQGSFRQAPE--LPGRQGCRAHRRSSADDPRSGCYDRGLRSSGPVRQRAVVPQRG 169
+RG+ QGS R PE L G+Q C S + C D P +PQ G
Sbjct: 48 KRGSRGQGSQRCIPEFFLAGKQPCTNDMAKSNSVGQDSCQDSEGDMIFPAESSCALPQEG 107
Query: 168 GHRP 157
P
Sbjct: 108 SAGP 111
>AF456237-1|AAP97705.1| 1043|Homo sapiens testis protein protein.
Length = 1043
Score = 29.9 bits (64), Expect = 7.8
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = -2
Query: 342 RRGALPQGSFRQAPE--LPGRQGCRAHRRSSADDPRSGCYDRGLRSSGPVRQRAVVPQRG 169
+RG+ QGS R PE L G+Q C S + C D P +PQ G
Sbjct: 48 KRGSRGQGSQRCIPEFFLAGKQPCTNDMAKSNSVGQDSCQDSEGDMIFPAESSCALPQEG 107
Query: 168 GHRP 157
P
Sbjct: 108 SAGP 111
>AF454502-1|AAP97700.1| 1042|Homo sapiens hypothetical protein
protein.
Length = 1042
Score = 29.9 bits (64), Expect = 7.8
Identities = 20/64 (31%), Positives = 25/64 (39%), Gaps = 2/64 (3%)
Frame = -2
Query: 342 RRGALPQGSFRQAPE--LPGRQGCRAHRRSSADDPRSGCYDRGLRSSGPVRQRAVVPQRG 169
+RG+ QGS R PE L G+Q C S + C D P +PQ G
Sbjct: 48 KRGSRGQGSQRCIPEFFLAGKQPCTNDMAKSNSVGQDSCQDSEGDMIFPAESSCALPQEG 107
Query: 168 GHRP 157
P
Sbjct: 108 SAGP 111
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,371,983
Number of Sequences: 237096
Number of extensions: 1149819
Number of successful extensions: 6713
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 6589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6713
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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