Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_B14
         (631 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ657282-1|ABG38251.1|  112|Drosophila melanogaster CG31909 prot...    29   6.9  
BT009987-1|AAQ22456.1|  888|Drosophila melanogaster RE51676p pro...    28   9.1  
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    28   9.1  

>DQ657282-1|ABG38251.1|  112|Drosophila melanogaster CG31909
           protein.
          Length = 112

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = -3

Query: 383 EISLDDSGREDIQSD--VERFLKDPSVKHLNSLGDRAAELID 264
           E SL ++ + ++Q+   VER L+D  +K  +S+ D    LID
Sbjct: 2   EPSLSNTNKSELQNQLRVERALQDKYLKEFSSMADELNHLID 43


>BT009987-1|AAQ22456.1|  888|Drosophila melanogaster RE51676p
           protein.
          Length = 888

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 210 SGPVRQRAVVPQRGGHRPRQATLPAVHSQ 124
           S P+ Q  V+ Q   + PRQ T PA H Q
Sbjct: 76  SQPLHQNMVLQQYTQYNPRQQTFPASHLQ 104


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
           initiation factoreIF4G protein.
          Length = 1666

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 210 SGPVRQRAVVPQRGGHRPRQATLPAVHSQ 124
           S P+ Q  V+ Q   + PRQ T PA H Q
Sbjct: 76  SQPLHQNMVLQQYTQYNPRQQTFPASHLQ 104


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,700,863
Number of Sequences: 53049
Number of extensions: 337821
Number of successful extensions: 909
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)