Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_B13
         (613 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0001555926 Cluster: PREDICTED: similar to Trim65 pro...    34   2.3  
UniRef50_A5DS16 Cluster: Putative uncharacterized protein; n=1; ...    33   5.3  
UniRef50_Q22W78 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  
UniRef50_Q9C4W1 Cluster: ORF88; n=1; Sulfolobus islandicus|Rep: ...    33   7.1  
UniRef50_A4BSK4 Cluster: Putative uncharacterized protein; n=1; ...    32   9.3  

>UniRef50_UPI0001555926 Cluster: PREDICTED: similar to Trim65
           protein; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
           similar to Trim65 protein - Ornithorhynchus anatinus
          Length = 317

 Score = 34.3 bits (75), Expect = 2.3
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
 Frame = +3

Query: 243 SITFLLFVSNKYMIFCCRNQIGQHKLRSVND*QNANALRPSH-RLWRLKLS-SIRNSLHN 416
           ++TF    +N+Y+   C+NQ   H  R+V      +  RP    LW++  S S ++  H 
Sbjct: 128 NLTFDPDTANRYLALSCQNQRASHGRRAVERGPGGDGERPGRFELWQVLCSQSFKSGCH- 186

Query: 417 IYHNYKVYDHGV 452
            Y   ++ DH V
Sbjct: 187 -YWEVRLSDHAV 197


>UniRef50_A5DS16 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 199

 Score = 33.1 bits (72), Expect = 5.3
 Identities = 13/33 (39%), Positives = 23/33 (69%)
 Frame = +3

Query: 168 KRSF*LLTINFQLSQALYLIIIV*FSITFLLFV 266
           K++F L ++NFQ     YL++++ F + FLLF+
Sbjct: 55  KKTFCLQSLNFQFDMVEYLLLMISFIVGFLLFI 87


>UniRef50_Q22W78 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 209

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = +2

Query: 38  NKSI*KSKQYFLWNPNIINNVLNKLFAFNVEKK 136
           N+ + KS QY L   N+I N+L K + F ++KK
Sbjct: 75  NQDLDKSLQYTLKTNNLIKNILKKFYKFLIDKK 107


>UniRef50_Q9C4W1 Cluster: ORF88; n=1; Sulfolobus islandicus|Rep:
           ORF88 - Sulfolobus islandicus
          Length = 88

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = -2

Query: 429 NCGIYCEVSYG*SLISIAITDVMASVHLHFASH*LILAYVDQF----DSYSKKSYIYWKQ 262
           NC     +     L   +ITD++A V   F SH L L  +  F    +++++K Y    Q
Sbjct: 17  NCSTGATIFLSTVLFLESITDILAPVPEFFLSHVLFLLVITNFSPSGENFAQKKYKNTGQ 76

Query: 261 IVRM*LKIIQ 232
           ++R+ L+I++
Sbjct: 77  VLRILLRIVK 86


>UniRef50_A4BSK4 Cluster: Putative uncharacterized protein; n=1;
           Nitrococcus mobilis Nb-231|Rep: Putative uncharacterized
           protein - Nitrococcus mobilis Nb-231
          Length = 495

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -1

Query: 574 QCLRQEGNGNRLFMYFNMLT*LSSMVSACIGYRFYSNN 461
           Q LRQ+G GN  +M   +   L  + SA + YR  S N
Sbjct: 416 QPLRQDGEGNLWYMQLGLTRDLGQLTSASLSYRHQSRN 453


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 528,354,053
Number of Sequences: 1657284
Number of extensions: 9323783
Number of successful extensions: 25324
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25319
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)