Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_B13
         (613 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical pr...    32   0.37 
AC024796-10|AAK29896.1|  623|Caenorhabditis elegans Hypothetical...    29   2.0  
Z36752-3|CAA85325.1|  422|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z82276-8|CAL69741.1|  281|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U64860-2|AAB04992.3|  373|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AC024826-17|AAF60789.1|  662|Caenorhabditis elegans Hypothetical...    28   6.0  
AC006625-13|ABI18147.1|  273|Caenorhabditis elegans Abnormal che...    28   6.0  
AC006625-12|AAK68272.2|  214|Caenorhabditis elegans Abnormal che...    28   6.0  
AF016437-1|AAB65884.2|  690|Caenorhabditis elegans Hypothetical ...    27   8.0  

>Z81064-5|CAB02964.2| 1392|Caenorhabditis elegans Hypothetical
           protein F16B12.6 protein.
          Length = 1392

 Score = 31.9 bits (69), Expect = 0.37
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = -1

Query: 295 LQQKIIYLLETNSKNVIENYTIMIKYN 215
           L++KI YL+ET SK V+ +  IM  YN
Sbjct: 880 LRKKIYYLMETQSKMVVSHALIMYDYN 906


>AC024796-10|AAK29896.1|  623|Caenorhabditis elegans Hypothetical
           protein Y48G1C.7 protein.
          Length = 623

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -1

Query: 295 LQQKIIYLLETNSKNVIENYTIMIKYN 215
           L++KI Y++ET S+ V+ +  IM  YN
Sbjct: 23  LRKKIYYMMETESRLVVSHALIMYDYN 49


>Z36752-3|CAA85325.1|  422|Caenorhabditis elegans Hypothetical
           protein F35H8.3 protein.
          Length = 422

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -2

Query: 471 ILITIRSHRGHKPYNCGIYCEVSY 400
           +L+  R H G KPY+CG YC  S+
Sbjct: 315 MLVHERIHTGEKPYSCG-YCMKSF 337


>Z82276-8|CAL69741.1|  281|Caenorhabditis elegans Hypothetical
           protein K03D3.14 protein.
          Length = 281

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 6/95 (6%)
 Frame = -2

Query: 501 WFLLVL-VIDSILITIRSHR----GHKPYNCGIYCEVSYG*SLISIAITDVMASV-HLHF 340
           W L ++ V+  I I + + R     +K YN      + YG  +  +AI  V++++ H   
Sbjct: 121 WILYIVHVLKEISIYVVTRRILKYQYKIYNPFSILGLVYGIIIFCMAIFSVLSALLHFPI 180

Query: 339 ASH*LILAYVDQFDSYSKKSYIYWKQIVRM*LKII 235
                 L Y+D     +  +YI+W  I  +  K+I
Sbjct: 181 VKKIRALTYLDSTQLSTLYTYIFWLTIFIVVFKVI 215


>U64860-2|AAB04992.3|  373|Caenorhabditis elegans Hypothetical
           protein R106.2 protein.
          Length = 373

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
 Frame = +3

Query: 129 KKNNDKTNRIITNKRSF*L----LTINFQLSQALYLIIIV*FSITFLLFVSNKYMIFCC 293
           +K   +T R  T KR+  +    L I    +       IV +SI   LF  +KY++FCC
Sbjct: 238 RKRQMQTKRTATKKRTTKVTIMGLAIVISYTHCWLPFWIVQWSIEANLFEKSKYLLFCC 296


>AC024826-17|AAF60789.1|  662|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.14 protein.
          Length = 662

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -2

Query: 456 RSHRGHKPYNCGIYCEVSY 400
           RSH G KPYNC  +C+ ++
Sbjct: 124 RSHTGEKPYNCH-FCQKTF 141


>AC006625-13|ABI18147.1|  273|Caenorhabditis elegans Abnormal
           chemotaxis protein 1,isoform b protein.
          Length = 273

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = -2

Query: 477 DSILIT--IRSHRGHKPYNCGI 418
           DS  +T  +R+H GHKPY C I
Sbjct: 233 DSSTLTKHLRTHTGHKPYVCSI 254


>AC006625-12|AAK68272.2|  214|Caenorhabditis elegans Abnormal
           chemotaxis protein 1,isoform a protein.
          Length = 214

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = -2

Query: 477 DSILIT--IRSHRGHKPYNCGI 418
           DS  +T  +R+H GHKPY C I
Sbjct: 174 DSSTLTKHLRTHTGHKPYVCSI 195


>AF016437-1|AAB65884.2|  690|Caenorhabditis elegans Hypothetical
           protein F13H6.1 protein.
          Length = 690

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 474 SILITIRSHRGHKPYNC 424
           ++++ +RSH G KPY C
Sbjct: 508 NLIVHLRSHTGEKPYKC 524


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,567,703
Number of Sequences: 27780
Number of extensions: 234272
Number of successful extensions: 526
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)