Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_B07
(791 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 365 e-100
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 324 2e-87
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 281 1e-74
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 279 6e-74
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 264 1e-69
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 237 2e-61
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 231 2e-59
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 200 4e-50
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 178 1e-43
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 170 3e-41
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 161 1e-38
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 157 4e-37
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 154 2e-36
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 151 2e-35
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 150 5e-35
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 150 5e-35
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 148 2e-34
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 146 6e-34
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 141 2e-32
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 140 3e-32
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 136 6e-31
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 134 2e-30
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 132 1e-29
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 132 1e-29
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 131 2e-29
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 129 7e-29
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 128 2e-28
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 121 2e-26
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 121 2e-26
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 117 3e-25
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 115 2e-24
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 112 1e-23
UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2... 107 3e-22
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 106 7e-22
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 100 5e-20
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 87 6e-16
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 84 4e-15
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 83 6e-15
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 82 2e-14
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 81 3e-14
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 79 1e-13
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 79 2e-13
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 77 4e-13
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 75 3e-12
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 73 6e-12
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 73 8e-12
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 73 8e-12
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 72 2e-11
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 71 3e-11
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 70 6e-11
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 70 8e-11
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 70 8e-11
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 69 1e-10
UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2; Mycoplas... 69 2e-10
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 67 4e-10
UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;... 66 7e-10
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 66 7e-10
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 62 1e-08
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 62 2e-08
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 61 3e-08
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 60 6e-08
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 59 1e-07
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 59 1e-07
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 58 2e-07
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 58 3e-07
UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3; Bacteria... 58 3e-07
UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 58 3e-07
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 57 4e-07
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 56 8e-07
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 56 8e-07
UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1; Neoricke... 54 3e-06
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 54 5e-06
UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, wh... 53 7e-06
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 53 7e-06
UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4; Ricketts... 52 1e-05
UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Re... 52 2e-05
UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;... 51 4e-05
UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3; ... 49 1e-04
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 48 2e-04
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 46 0.001
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 45 0.003
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 44 0.004
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 43 0.008
UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S riboso... 42 0.018
UniRef50_Q6CAL1 Cluster: Similar to sp|P33759 Saccharomyces cere... 42 0.018
UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lambl... 41 0.041
UniRef50_Q4PBG0 Cluster: Putative uncharacterized protein; n=1; ... 40 0.095
UniRef50_UPI00015B5E49 Cluster: PREDICTED: similar to 28S riboso... 39 0.12
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.50
UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2; ... 35 2.7
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 34 3.6
UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1... 34 4.7
UniRef50_Q2JDT3 Cluster: Exodeoxyribonuclease III; n=30; Bacteri... 33 6.2
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 33 6.2
UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n... 33 8.2
UniRef50_A4MJQ3 Cluster: Heat shock protein DnaJ domain protein;... 33 8.2
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 365 bits (898), Expect = e-100
Identities = 172/216 (79%), Positives = 183/216 (84%)
Frame = -2
Query: 673 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQ 494
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEV KIMPVQ
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 493 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 314
KQTRAGQRTRFKAFVAIGD NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNK
Sbjct: 114 KQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNK 173
Query: 313 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 134
IGKPHTVPCKVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TL
Sbjct: 174 IGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATL 233
Query: 133 GNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 26
GNF YLTPDLW++ TKSPY EF
Sbjct: 234 GNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEF 269
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 324 bits (796), Expect = 2e-87
Identities = 141/216 (65%), Positives = 178/216 (82%)
Frame = -2
Query: 673 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQ 494
++++KEWVPVTKLGRLV+ GKI +E IYL+SLPIKE++I+D+FL P LNDEV K++PVQ
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQ 86
Query: 493 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 314
KQTRAGQRTRFKAFV IGD++GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG
Sbjct: 87 KQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTA 146
Query: 313 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 134
+G PHTVP KV+GKCGSVTVRL+PAPRG G+V+APV K+ LQ+AG++DCYT +RGST TL
Sbjct: 147 LGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKTL 206
Query: 133 GNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 26
GNF LTP+LW + P ++P E+
Sbjct: 207 GNFVKAAFAAASLTYGILTPNLWAERPFGQTPIEEY 242
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 281 bits (689), Expect = 1e-74
Identities = 132/215 (61%), Positives = 160/215 (74%)
Frame = -2
Query: 670 EDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQK 491
+D+ WVP TKLGRLV++GKI LE I+LFSLPIKE +I++ F+G L DEV KI PVQK
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQK 104
Query: 490 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKI 311
QT AGQR RFKAFV +GD NGHIGLGVK KEVA +I+G++ILAKL+++PVRRGYWG+K+
Sbjct: 105 QTTAGQRMRFKAFVVVGDCNGHIGLGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKL 164
Query: 310 GKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 131
G+PHT+P KV GKCGSV VRLIPAPRG GIV++ KK+L MAG+ D YT +RG T TLG
Sbjct: 165 GEPHTIPTKVHGKCGSVHVRLIPAPRGAGIVASGTVKKVLAMAGLHDVYTCSRGHTRTLG 224
Query: 130 NFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 26
N +LTPDLW + K P EF
Sbjct: 225 NSVKATYEALKNSYGFLTPDLWAETRFAKPPAQEF 259
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 279 bits (684), Expect = 6e-74
Identities = 131/210 (62%), Positives = 159/210 (75%)
Frame = -2
Query: 667 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQKQ 488
++K WVPVTKLGRLV+ GKI +E I+L SLP+KEF+IID L P L DEV I PVQKQ
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQ 89
Query: 487 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 308
TRAGQRTRFKA V +GD+NGH+GLG+K +KEVA AIR II+AKLSV+P+RRGYWG +G
Sbjct: 90 TRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLG 149
Query: 307 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 128
+PH++ K TGKCGSVTVRLIPAPRG+GIV++P KKLLQ+AGV+D YT + G T TL N
Sbjct: 150 QPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLEN 209
Query: 127 FXXXXXXXXXXXXXYLTPDLWRDIPLTKSP 38
+LTP+LW + PL SP
Sbjct: 210 TLKAAFVAIGNTYGFLTPNLWAEQPLPVSP 239
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 264 bits (648), Expect = 1e-69
Identities = 125/166 (75%), Positives = 135/166 (81%)
Frame = -2
Query: 523 DEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 344
DEV KIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 343 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 164
P+R+GYWGNKIGKP+TVPCKVTG CGSV V LIPAPRGTG+VSAPVPKKLL MAG+ DCY
Sbjct: 108 PLRQGYWGNKIGKPNTVPCKVTGHCGSVLVCLIPAPRGTGMVSAPVPKKLLMMAGIDDCY 167
Query: 163 TSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 26
TSAR T +LGNF YLTPDLW++ TKSPY EF
Sbjct: 168 TSARDCTASLGNFAKATFDTISKTYTYLTPDLWKETVFTKSPYEEF 213
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 237 bits (581), Expect = 2e-61
Identities = 113/139 (81%), Positives = 120/139 (86%)
Frame = -2
Query: 652 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQKQTRAGQ 473
+PVTKLG L+ + KI LE IYLFSLPIKE EIIDFFLG SL DEV KIMPVQKQT AGQ
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQ 60
Query: 472 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 293
TRFKAFV IGD NGH+GL VKCSKEVATAIRGAIILAKLS++PV RGYWGNKIGKPHTV
Sbjct: 61 HTRFKAFVPIGDYNGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRGYWGNKIGKPHTV 120
Query: 292 PCKVTGKCGSVTVRLIPAP 236
PCKVTG+C SV V LIPAP
Sbjct: 121 PCKVTGRCSSVLVHLIPAP 139
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 231 bits (564), Expect = 2e-59
Identities = 107/216 (49%), Positives = 141/216 (65%)
Frame = -2
Query: 673 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQ 494
++++ EW+P T +GRLV+ KI LE I+ FS I+E EI+D G S+ +EV I VQ
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKFSHVIREPEIVDLLCGNSIKEEVLSIKSVQ 74
Query: 493 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 314
KQTRAGQ+TR KA V +GD GH+G+G K SKE A+AIRGAI AK ++ PVR G W
Sbjct: 75 KQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEAASAIRGAIARAKCAIRPVRLGLWDGA 134
Query: 313 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 134
GKPHTV CK +GKCG+ V++IPAPRGTGI+S V KK+ ++AG++D YT + G+T T
Sbjct: 135 QGKPHTVSCKGSGKCGTSVVQVIPAPRGTGIISGSVNKKIFELAGIKDLYTLSFGATSTT 194
Query: 133 GNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 26
NF + PD W + P T +P EF
Sbjct: 195 ENFAKASIAALEATSSMILPDQWEEKPRTLNPLLEF 230
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 200 bits (487), Expect = 4e-50
Identities = 92/114 (80%), Positives = 100/114 (87%)
Frame = -2
Query: 472 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTV 293
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RGYWGN+I KPHTV
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRGYWGNEIRKPHTV 120
Query: 292 PCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLG 131
P KVTG+CGSV VRLIPAPRGTG VSAPVPKKLL MAG+ DCYTSARG T T G
Sbjct: 121 PGKVTGRCGSVLVRLIPAPRGTGFVSAPVPKKLLMMAGIDDCYTSARGHTATWG 174
Score = 33.5 bits (73), Expect = 6.2
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -2
Query: 667 DQKEWVPVTKLGRLVREGKI 608
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 178 bits (434), Expect = 1e-43
Identities = 100/167 (59%), Positives = 118/167 (70%)
Frame = -2
Query: 649 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQKQTRAGQR 470
P +KLG LV++ +I L IYLFSLPIKE EIID FLG +L DEV K +P QK TR GQ
Sbjct: 51 PASKLGCLVKD-EIKSLGEIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQY 109
Query: 469 TRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVP 290
+KA GD NGH+ G+ EVA I+ IIL KL ++PV RGY G+K KPHTV
Sbjct: 110 --YKA----GDYNGHVITGLD---EVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHTVL 160
Query: 289 CKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARG 149
CKVTG GSV++ LIPAPR T I SAP+PKKLL MAG+ DC+TSARG
Sbjct: 161 CKVTGH-GSVSLHLIPAPRDTVISSAPMPKKLLMMAGINDCHTSARG 206
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 170 bits (414), Expect = 3e-41
Identities = 102/215 (47%), Positives = 128/215 (59%)
Frame = -2
Query: 664 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQKQT 485
+ +W+P+TKLG LV+E KI LE IY FSL + + F P+ KQT
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEH----------PLIKQT 100
Query: 484 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGK 305
Q+TRFKA V +G + GH+ LG+K S EVA IILAKLS++PV G ++ +
Sbjct: 101 CTDQQTRFKASVTVG-SYGHVSLGIKYSMEVA------IILAKLSIIPVETATGGKRL-E 152
Query: 304 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 125
PH VPC+VTG+CGS+ V LIPAPRGTG VSAPVP KLL MAG+ D +SA G T TLGNF
Sbjct: 153 PHMVPCRVTGRCGSLLVHLIPAPRGTGTVSAPVP-KLLMMAGIDDS-SSASGCTATLGNF 210
Query: 124 XXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEFKV 20
YL PDL ++ KS Y +V
Sbjct: 211 TKAIFDTISKTHSYLIPDLQKETVFAKSLYQNSRV 245
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 161 bits (392), Expect = 1e-38
Identities = 82/181 (45%), Positives = 120/181 (66%), Gaps = 2/181 (1%)
Frame = -2
Query: 661 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQKQTR 482
+EW P T +G LV+EGKI ++ ++ +LPI E EI+D L P L EV I VQKQT
Sbjct: 11 EEWKPRTSIGSLVKEGKISSIKELFDRNLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTD 69
Query: 481 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIG 308
AG+ +R+K V +G+ +G++ +G +K++ AI+ AI AK++++PVRRG W G
Sbjct: 70 AGEISRYKVLVIMGNMDGYVSIGTGKAKQLRVAIQKAIRDAKMNIIPVRRGCGSWQCTCG 129
Query: 307 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 128
+PH++P KV GK GSV V L+PAP+GTG+V V K LL AG++D +++ +G T T N
Sbjct: 130 EPHSLPFKVVGKAGSVEVDLLPAPKGTGLVVGSVLKTLLTYAGIKDAWSTTKGETRTTEN 189
Query: 127 F 125
F
Sbjct: 190 F 190
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 157 bits (380), Expect = 4e-37
Identities = 81/185 (43%), Positives = 116/185 (62%), Gaps = 2/185 (1%)
Frame = -2
Query: 673 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQ 494
K + + W P T++GR+V+EG I + I LP+ E EI+D L P L ++V + VQ
Sbjct: 10 KFNTEAWEPKTQIGRMVKEGTISDISYIMDKGLPLLEPEIVDALL-PDLEEQVLDVKLVQ 68
Query: 493 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WG 320
+ ++G+R R++A V +G+ NG++G+G+ SKEV AIR AI AKLS++ VR G W
Sbjct: 69 RMHKSGRRARYRATVVVGNKNGYVGVGMGKSKEVGPAIRKAIAHAKLSLIKVRVGCGSWE 128
Query: 319 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTG 140
G PH++P G CGSV V L+PAPRG G+V+ V K +L +AGV+D +T G T
Sbjct: 129 CGCGSPHSIPFTAKGACGSVKVELLPAPRGVGLVAGNVAKAVLGLAGVKDAWTKTFGDTR 188
Query: 139 TLGNF 125
T NF
Sbjct: 189 TTYNF 193
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 154 bits (374), Expect = 2e-36
Identities = 84/184 (45%), Positives = 114/184 (61%), Gaps = 6/184 (3%)
Frame = -2
Query: 658 EWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLN----DEVXKIMPVQK 491
EW P TKLG +V+EG+I + I+ IKE EIID L P +N EV I +
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIKEPEIIDVLL-PEVNARENQEVLDIALTVR 73
Query: 490 QTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGN 317
T +G+R RF+ A+G+ +G++GLG+ KEV AIR AI AKL+++ ++RG W
Sbjct: 74 MTDSGRRVRFRVLAAVGNRDGYVGLGIGHGKEVGIAIRKAINYAKLNIIEIKRGCGSWEC 133
Query: 316 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 137
+ +PH+VP V GK GSV VRLIP PRG G+V V KK+L++AGVQD ++ G T T
Sbjct: 134 RCRRPHSVPFAVEGKEGSVRVRLIPGPRGLGLVIGDVGKKILRLAGVQDVWSQTFGETRT 193
Query: 136 LGNF 125
NF
Sbjct: 194 TVNF 197
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 151 bits (366), Expect = 2e-35
Identities = 76/181 (41%), Positives = 111/181 (61%), Gaps = 2/181 (1%)
Frame = -2
Query: 661 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQKQTR 482
+EW P T+LGRLV G+I + LP+KE++I+D+ + P L DEV I Q+ T
Sbjct: 3 EEWTPRTELGRLVANGEIKTISEALHSKLPLKEYQIVDYLI-PDLKDEVINIERAQRMTD 61
Query: 481 AGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIG 308
+G+R + +G+ NG++G+G +KE A AI+ AI AKL+++ ++RG W G
Sbjct: 62 SGRRMNYSITAVVGNGNGYVGVGRGKAKEAAPAIKKAIDNAKLNIIEIKRGCGSWECGCG 121
Query: 307 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 128
KPHT+P V GK GSV+V L PAP+G G+ V K +L+MAG+ D + A G T T N
Sbjct: 122 KPHTLPFLVNGKSGSVSVTLKPAPQGVGLAVGDVVKVILRMAGIDDAWGFAAGHTKTTVN 181
Query: 127 F 125
+
Sbjct: 182 Y 182
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 150 bits (363), Expect = 5e-35
Identities = 101/214 (47%), Positives = 121/214 (56%)
Frame = -2
Query: 667 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQKQ 488
+ K+W+PV KL LVR + L FSL K+ II FFL SL DE IMPVQ Q
Sbjct: 59 EDKQWMPVIKLCHLVRTWRYRDLP----FSLLNKKSMIIGFFLRTSLRDE---IMPVQTQ 111
Query: 487 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 308
T R FK FV+I D + H+ L KCSK+ ATAI VL V +G ++G
Sbjct: 112 TWLPSRP-FKDFVSIRDYSSHVDLDDKCSKKTATAI----------VL-VWKGTRETRLG 159
Query: 307 KPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGN 128
TV CKVTG+C SV + LIP R I+SAPVPKKLL +A + DCYTSARG T TL N
Sbjct: 160 SL-TVSCKVTGQCVSVLICLIPPTRN--IISAPVPKKLLLLANIDDCYTSARGCTATLDN 216
Query: 127 FXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSEF 26
F YLTP+LW+ + KS Y EF
Sbjct: 217 FDKATFNAISNTYSYLTPNLWKGLVFAKSTYLEF 250
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 150 bits (363), Expect = 5e-35
Identities = 81/182 (44%), Positives = 115/182 (63%), Gaps = 2/182 (1%)
Frame = -2
Query: 667 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQKQ 488
+++ WVP T LG+ V G+I LE I L I+E II L P L EV + +QK
Sbjct: 42 EEEVWVPKTILGQKVASGEISSLEEIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKM 100
Query: 487 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNK 314
T GQ TRFKA VA G+ NG++G+G SK++ AI A A L+V P++ G W +
Sbjct: 101 TSNGQSTRFKAIVATGNENGYLGIGQGKSKQMRIAIEKATNAAYLNVNPIKMGCGSWECR 160
Query: 313 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTL 134
+ H+VP KV GK GSVT+ +IPAPRG G+V+ K+LL++AG++D +T+A+GST T+
Sbjct: 161 CDQKHSVPFKVKGKGGSVTIEIIPAPRGLGLVAGGKIKRLLELAGLKDAWTTAKGSTPTM 220
Query: 133 GN 128
+
Sbjct: 221 NS 222
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 148 bits (358), Expect = 2e-34
Identities = 70/86 (81%), Positives = 75/86 (87%)
Frame = -2
Query: 673 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQ 494
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEV KIMPVQ
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 88
Query: 493 KQTRAGQRTRFKAFVAIGDNNGHIGL 416
KQTRAGQRTRFKAFVAIGD NGH+GL
Sbjct: 89 KQTRAGQRTRFKAFVAIGDYNGHVGL 114
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 146 bits (354), Expect = 6e-34
Identities = 75/179 (41%), Positives = 110/179 (61%), Gaps = 2/179 (1%)
Frame = -2
Query: 655 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQKQTRAG 476
W P T+LG+ V EG+ID ++ LP+KE E++D + P L DEV I VQ+ T +G
Sbjct: 7 WEPRTRLGKQVVEGEIDSMQEALNSGLPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSG 65
Query: 475 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKP 302
+R +F+ VA+G+ +G IG +V AI+ AI +AKL+++ V RG W G+P
Sbjct: 66 RRVKFRCVVAVGNRDGLIGYAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCGSWECGCGRP 125
Query: 301 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 125
HTV + GK GSV V L PAPRG G+ +K+L++AG++D +T + G+T T NF
Sbjct: 126 HTVALRTEGKAGSVEVELQPAPRGLGLAGGETVRKVLELAGIEDIWTRSSGNTRTTVNF 184
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 141 bits (341), Expect = 2e-32
Identities = 75/202 (37%), Positives = 116/202 (57%), Gaps = 2/202 (0%)
Frame = -2
Query: 655 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQKQTRAG 476
W P T+LGR V+ G I +E LP+KE EI+D L P L DEV I VQ+ T +G
Sbjct: 58 WEPRTRLGRKVQNGDISSMEQALDSGLPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSG 116
Query: 475 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNKIGKP 302
+R +F+ VA+G+ +G++G +V AI+ AI +AKL+++ V RG W ++ G
Sbjct: 117 RRVKFRCVVAVGNRDGYLGYAQARDDQVGGAIQKAIDVAKLNIIEVDRGSGSWEDQPGGT 176
Query: 301 HTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFX 122
+++ K GK GSVTV + PAP+G G+ +A + +L++AGV+D +T++ G+T T N
Sbjct: 177 NSLTRKAEGKAGSVTVEIQPAPQGLGLAAAETVRNILELAGVEDAWTNSDGNTRTTVNLA 236
Query: 121 XXXXXXXXXXXXYLTPDLWRDI 56
TP R++
Sbjct: 237 KATFNALENAAQSRTPQHAREV 258
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 140 bits (340), Expect = 3e-32
Identities = 77/179 (43%), Positives = 110/179 (61%), Gaps = 2/179 (1%)
Frame = -2
Query: 667 DQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQKQ 488
++ WVP T LG+ V G+I LE I I+E II L P L EV + +QK
Sbjct: 23 EEAPWVPKTALGKRVNAGEITSLEEIQEAGARIQESGIIKKLL-PDLKTEVVDVGIIQKM 81
Query: 487 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGY--WGNK 314
T GQ TRFKA VA G+ NG++G+G +K++ AI A A L+V P++ G W +
Sbjct: 82 TSNGQSTRFKAIVAAGNENGYLGIGQGKAKQMRIAIEKANNQALLNVGPIKLGCGSWECR 141
Query: 313 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 137
+ H+VP KV GK GSV + ++PAPRG G+V+ ++LL++AG++D YT+A+GST T
Sbjct: 142 CDQKHSVPFKVRGKGGSVVIEILPAPRGLGLVAGGKIRRLLELAGLKDAYTTAKGSTPT 200
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 136 bits (329), Expect = 6e-31
Identities = 95/207 (45%), Positives = 118/207 (57%), Gaps = 1/207 (0%)
Frame = -2
Query: 652 VPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQKQTRAGQ 473
+PVTKLG LV++ KI L P+KEFEI DFFL SL D+V KI+P+ + R Q
Sbjct: 1 IPVTKLGCLVKDIKIKYL--------PVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQ 51
Query: 472 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGKPHT 296
TRF +F I + GH G+GVKCSK+V TA+ + + L S LP R Y GN I KP T
Sbjct: 52 WTRFNSFDTI-NYGGHNGIGVKCSKKVGTAVGLSSWSSFLSSCLP--RDYCGNNIRKP-T 107
Query: 295 VPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXX 116
PCK TG S++ L P IVS VP+KL+ A + CYTSAR T TLGN
Sbjct: 108 YPCKRTG--WSISF-LFPETLAF-IVSVLVPRKLMLRASIDSCYTSARSYTVTLGNIAKA 163
Query: 115 XXXXXXXXXXYLTPDLWRDIPLTKSPY 35
TP+LW++ TKSPY
Sbjct: 164 TFDAVSKTSHS-TPNLWKEAVFTKSPY 189
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 134 bits (324), Expect = 2e-30
Identities = 79/163 (48%), Positives = 95/163 (58%)
Frame = -2
Query: 550 DFFLGPSLNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 371
D L ++ + +I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 370 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 191
IIL + S+ G+ GNKI KPHTV C+VT SV V I APRGT I+SAPVPKKLL
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVSCRVTRLYCSVLVHHISAPRGTDILSAPVPKKLL 114
Query: 190 QMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWR 62
+MA + D + ARG T L N LT D WR
Sbjct: 115 RMASIDDGDSLARGCTAILDN-VIKATYDISKTYVSLTSDFWR 156
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 132 bits (318), Expect = 1e-29
Identities = 61/87 (70%), Positives = 65/87 (74%)
Frame = -2
Query: 286 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXX 107
KVTG+CGSV VRLIPAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNF
Sbjct: 125 KVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFD 184
Query: 106 XXXXXXXYLTPDLWRDIPLTKSPYSEF 26
YLTPDLW++ TKSPY EF
Sbjct: 185 AISKTYSYLTPDLWKETVFTKSPYQEF 211
Score = 122 bits (293), Expect = 1e-26
Identities = 58/72 (80%), Positives = 62/72 (86%)
Frame = -2
Query: 673 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQ 494
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIKE EIIDFFLG SL DEV KIMPVQ
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQ 113
Query: 493 KQTRAGQRTRFK 458
KQTRAGQRTRFK
Sbjct: 114 KQTRAGQRTRFK 125
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 132 bits (318), Expect = 1e-29
Identities = 62/179 (34%), Positives = 107/179 (59%)
Frame = -2
Query: 601 LESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 422
L+ ++L + ++++ G SL +V + + V + T++G++ + K V +GD +GH+
Sbjct: 84 LDYLFLKRIFFHNNKLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHV 143
Query: 421 GLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIP 242
GLGVK S + I+ A+ AKL++ +RRGYW + GKP+T+ K +GK GSV V + P
Sbjct: 144 GLGVKSSMDSKAGIKAALRKAKLAITKIRRGYWEIEEGKPNTIKYKTSGKAGSVVVCIKP 203
Query: 241 APRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLW 65
AP+GTGIV++ +L+++G++DC+T + G T + N ++TPD W
Sbjct: 204 APKGTGIVASKFQLNVLKISGIRDCFTKSFGRTKSSFNTIKATFNALSSSYKFVTPDYW 262
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 131 bits (316), Expect = 2e-29
Identities = 68/170 (40%), Positives = 105/170 (61%), Gaps = 2/170 (1%)
Frame = -2
Query: 628 LVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQKQTRAGQRTRFKAFV 449
+V +GKI E LPI+E EI+D L P L+D+V + +Q+ T +G+R RF
Sbjct: 1 MVADGKILSYEEALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLC 59
Query: 448 AIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR--GYWGNKIGKPHTVPCKVTG 275
+G+++G++GL + KEVA+ IR AI AKL+++PV R G W + G +VP K+TG
Sbjct: 60 VVGNSDGYVGLAICKGKEVASTIRKAIDKAKLNMIPVMRGNGSWESGGGPGTSVPLKITG 119
Query: 274 KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 125
+ GS V L+PAP G G+V + +++L +AGV D ++ + G T T N+
Sbjct: 120 RSGSTRVTLMPAPAGKGLVVSDYGRRVLTLAGVTDVWSRSAGQTRTTINY 169
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 129 bits (312), Expect = 7e-29
Identities = 76/193 (39%), Positives = 110/193 (56%), Gaps = 15/193 (7%)
Frame = -2
Query: 661 KEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPV----- 497
+EW P TKLGRLV+EGKI ++ I I+E EI+D L P+L E K +
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEILSNKYVIREPEIVDVLL-PNLEVEFMKWRIIRGKFR 63
Query: 496 --------QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLP 341
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++
Sbjct: 64 SKKPYRMAQKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIK 123
Query: 340 VRRGY--WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDC 167
V RG W G PH++P +V GK GSV V L PAP+G GIV+ KK+ ++AG++D
Sbjct: 124 VARGCGSWECACGAPHSIPYQVEGKSGSVRVILKPAPKGVGIVADDEIKKIFRLAGIKDV 183
Query: 166 YTSARGSTGTLGN 128
+ + G T T N
Sbjct: 184 WVRSFGKTKTKMN 196
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 128 bits (309), Expect = 2e-28
Identities = 78/212 (36%), Positives = 123/212 (58%), Gaps = 2/212 (0%)
Frame = +2
Query: 38 WRLSQRDVPPQVRSEVGICLGNGSICGFSKISQGAS*TTS*GVAVLYTSHLKKLLRNWRR 217
W SQ PQV S+ + + +G+ G + Q + T+ GV + TS L +LL +W
Sbjct: 18 WGRSQSLDFPQVWSQETVGVTDGNESGLQSVFQSSGGTSRRGVDIFNTSQLHQLLDSWGG 77
Query: 218 HNSSTTRGRNQPDCYRTTLAGDLARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDF 397
++ T+ NQ + TTL L GV L+ + TPVTSS+W N QL D++ S+G+ +F
Sbjct: 78 DDTGTSWSWNQSNGNGTTLTRGLGSQGVRLTQVGTPVTSSDWDNGQLGDDDTGSDGTSNF 137
Query: 398 LAALHTQTNMTVVVANGNKCLETCALSGTCLFLYRHDLXNLIIQGRAEEEINDLEFFDW* 577
L+ L+TQT++TV V N + LE+ +L+ + L L R D+ N I+Q ++ +NDLEF DW
Sbjct: 138 LSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLDRLDVHNFILQ-VWQQLVNDLEFLDWQ 196
Query: 578 RKQVNALEFVDFSFANKTAEFGDRNP--LFLV 667
R Q + + D + +++ + G+ NP FLV
Sbjct: 197 RVQEDFFDGRDLAGLHQSTQLGNWNPTLFFLV 228
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 121 bits (292), Expect = 2e-26
Identities = 65/124 (52%), Positives = 77/124 (62%)
Frame = -2
Query: 496 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGN 317
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQLGE---------T 51
Query: 316 KIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGT 137
++ + V KVT GSV V LIPAPRGTGIVSAPV K L AG+ +CY SAR T T
Sbjct: 52 RLSRSTLVQYKVTSHYGSVLVHLIPAPRGTGIVSAPVLTKFLMNAGIYNCYISARCYTAT 111
Query: 136 LGNF 125
L NF
Sbjct: 112 LYNF 115
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 121 bits (292), Expect = 2e-26
Identities = 58/96 (60%), Positives = 77/96 (80%)
Frame = -2
Query: 664 QKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQKQT 485
++EWVP+TKLGRLV+ GKI LE+I+ FS+PIKE++I+D FL +L +E I PVQKQT
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQFSIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQT 119
Query: 484 RAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 377
AGQ+TRFKA+V +GD++ HIGLG K +KEV AI+
Sbjct: 120 CAGQKTRFKAYVVVGDSHQHIGLGWKSAKEVQGAIQ 155
Score = 45.2 bits (102), Expect = 0.002
Identities = 32/109 (29%), Positives = 48/109 (44%)
Frame = -1
Query: 344 TSSKRLLG*QDRKATHRPLQGHRQVWFCNSPADSCPSWYWNCVCASS*EASSDGWCTGLL 165
+S KR+LG QDR TH P+Q R+ S S YW E ++GW LL
Sbjct: 169 SSQKRILGKQDRLTTHSPMQSDRKGRISQSQIGSSTQRYWYSCSHHIQEGLTNGWYPRLL 228
Query: 164 HLSSWFNWHLGKFC*SHICCHCQDICLPHS*LVEGHPAD*VSILRVQSL 18
H + K S++ C +++ P+ + H +ILR Q +
Sbjct: 229 HSIQRKYKNQIKLLESNLPCPQRNLQFPNPRSLGTHQIRINTILRTQRI 277
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 117 bits (282), Expect = 3e-25
Identities = 57/87 (65%), Positives = 61/87 (70%)
Frame = -2
Query: 286 KVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXX 107
KVTG+CGSV VRL APRGTGIVSAPVPKKLL MA + DCYT ARG T TLGNF
Sbjct: 125 KVTGRCGSVLVRLFSAPRGTGIVSAPVPKKLLMMA-IDDCYTLARGCTATLGNFAKATFD 183
Query: 106 XXXXXXXYLTPDLWRDIPLTKSPYSEF 26
YLTPDLW++ TKSPY EF
Sbjct: 184 AISKIYSYLTPDLWKETVFTKSPYQEF 210
Score = 107 bits (258), Expect = 2e-22
Identities = 52/72 (72%), Positives = 57/72 (79%)
Frame = -2
Query: 673 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQ 494
K + KEW+P TKLG LV++ KI LE IYLFSLPIK EIIDFFLG SL +EV K MPVQ
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQ 113
Query: 493 KQTRAGQRTRFK 458
KQTRAGQ TRFK
Sbjct: 114 KQTRAGQWTRFK 125
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 115 bits (276), Expect = 2e-24
Identities = 78/167 (46%), Positives = 93/167 (55%), Gaps = 1/167 (0%)
Frame = -2
Query: 673 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQ 494
K + K WV + LG LV+E KI LES FS +II+FFLG L DEV + M Q
Sbjct: 18 KAEDKAWVFINNLGCLVKE-KIKSLESCSPFS----SSDIIEFFLGEHLKDEVLRTMLAQ 72
Query: 493 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 314
Q RTR K F + + L V CSKEV TA + AI L + + GY GNK
Sbjct: 73 NQ-----RTRIKVFFFLTIRSPMTTL-VNCSKEVGTAAQRAITLLSF-LFSTQTGYKGNK 125
Query: 313 IGKPHTVPCKVTG-KCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 176
IG PHT+PC VT + V V L APRGTG VSA VPKKL +A +
Sbjct: 126 IGNPHTIPCDVTATEKNLVLVCLTTAPRGTGTVSASVPKKLPLLASI 172
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 112 bits (269), Expect = 1e-23
Identities = 59/131 (45%), Positives = 85/131 (64%)
Frame = +2
Query: 281 DLARDGVWLSDLVTPVTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCL 460
+LA GV +DLVTPV S++ N QL +D+S ++G G FLAAL QT++ V V +G++ L
Sbjct: 18 NLAGHGVGFTDLVTPVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGL 77
Query: 461 ETCALSGTCLFLYRHDLXNLIIQGRAEEEINDLEFFDW*RKQVNALEFVDFSFANKTAEF 640
E L+GT L L HDL + ++Q A+EEI+DLE F+ R QV+ L+ D + A++ +
Sbjct: 78 EARTLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFNGQRVQVDLLQGADLAIAHQATQL 137
Query: 641 GDRNPLFLVFL 673
G NP VFL
Sbjct: 138 GHWNPFLRVFL 148
>UniRef50_Q9BSW5 Cluster: RPS2 protein; n=26; Coelomata|Rep: RPS2
protein - Homo sapiens (Human)
Length = 97
Score = 107 bits (257), Expect = 3e-22
Identities = 49/73 (67%), Positives = 52/73 (71%)
Frame = -2
Query: 244 PAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLW 65
PAPRGTGIVSAPVPKKLL MAG+ DCYTSARG T TLGNF YLTPDLW
Sbjct: 1 PAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLW 60
Query: 64 RDIPLTKSPYSEF 26
++ TKSPY EF
Sbjct: 61 KETVFTKSPYQEF 73
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 106 bits (254), Expect = 7e-22
Identities = 52/65 (80%), Positives = 55/65 (84%)
Frame = -2
Query: 613 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDN 434
KI LE IYLFSLPIKE EIIDFFLG SL DEV KIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 433 NGHIG 419
NG+ G
Sbjct: 62 NGYAG 66
Score = 69.7 bits (163), Expect = 8e-11
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Frame = -1
Query: 440 RQQRSYWFGCEVQQGSRHCHSRRYYPC*VVCFTSSKRLLG*QDRKATHRPLQGHRQVWFC 261
R Y EV QG H R ++P + ++RLLG QDR+A HRPLQG R + C
Sbjct: 59 RDYNGYAGRVEVLQGGGRRHPRGHHPDQALHCHRAQRLLGEQDRQAPHRPLQGDRPLRLC 118
Query: 260 NSPADSCPSWYWNCVCASS*EASSDGWCTGLLHLSSWFNWHLGKFC*SHI-CC 105
+W+ + + + EA+ D W LLHLS + H G+ H+ CC
Sbjct: 119 AGALHPRAQGHWHRLSSCAQEAAHDSWYLRLLHLSQGLHCHPGQLRQRHLGCC 171
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 100 bits (239), Expect = 5e-20
Identities = 48/66 (72%), Positives = 50/66 (75%)
Frame = -2
Query: 322 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 143
GNKIGK H V CKVTG CGSV V LIPA RGTGI SAPVP K L MAG+ DCYTSARG T
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSVLVHLIPAHRGTGISSAPVPTKPLMMAGIDDCYTSARGCT 66
Query: 142 GTLGNF 125
+L F
Sbjct: 67 ASLDYF 72
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 86.6 bits (205), Expect = 6e-16
Identities = 45/93 (48%), Positives = 63/93 (67%)
Frame = -2
Query: 625 VREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQKQTRAGQRTRFKAFVA 446
V++ K+ L+ +YLFSLPIKEFE+ DF LG L D+V K+M VQKQ +AG+R RFK V
Sbjct: 132 VKDMKMKSLK-VYLFSLPIKEFEVTDFLLGVPLKDKVLKLMFVQKQPKAGRRIRFKVIVT 190
Query: 445 IGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 347
I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 191 IRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 83.8 bits (198), Expect = 4e-15
Identities = 41/78 (52%), Positives = 54/78 (69%)
Frame = -2
Query: 649 PVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQKQTRAGQR 470
PVTKLGRLV++GK+ ++ I+ F + IKE++I+D L L +EV I VQKQT G+
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEFGIKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKE 94
Query: 469 TRFKAFVAIGDNNGHIGL 416
R KA VAIGD+NGH L
Sbjct: 95 PRLKASVAIGDHNGHRAL 112
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 83.4 bits (197), Expect = 6e-15
Identities = 46/133 (34%), Positives = 74/133 (55%)
Frame = -2
Query: 532 SLNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 353
+ + V KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 352 SVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQ 173
+++ V++ K ++ V G+ G+ V L+PAP GTGI++ + ++++AG
Sbjct: 108 NLIKVKQ-------TKKGSIYHDVNGRHGAAKVMLLPAPEGTGIIAGGPVRAVVELAGFT 160
Query: 172 DCYTSARGSTGTL 134
D YT +RG+ +
Sbjct: 161 DIYTKSRGANAPM 173
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 81.8 bits (193), Expect = 2e-14
Identities = 75/216 (34%), Positives = 93/216 (43%), Gaps = 7/216 (3%)
Frame = -2
Query: 655 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQKQTRAG 476
W+ +T L L + KI E + LF P K I F G SL D++ + + +
Sbjct: 34 WLQITTLYGLFKNMKIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSS 93
Query: 475 QRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGYWGNKIGK-- 305
QRT+ GH GL CS EVATAI+ I + L S P+ R GN GK
Sbjct: 94 QRTK-----------GHSGLSSMCSGEVATAIQVLGITSYLGSPWPLCRE--GNMTGKSL 140
Query: 304 PHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM----AGVQDCYTSARGSTGT 137
P P ++ S+ LI AP T I+S VPK LL + A D SA G T
Sbjct: 141 PSVCPMQIRDYHSSMLACLITAP-STCIISGLVPKNLLLLLLLLASTDDRCISASGCTDA 199
Query: 136 LGNFXXXXXXXXXXXXXYLTPDLWRDIPLTKSPYSE 29
LG LTPDLW TK YSE
Sbjct: 200 LGRLAKTTFDAISKTYSCLTPDLWNK---TKPLYSE 232
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 81.0 bits (191), Expect = 3e-14
Identities = 42/126 (33%), Positives = 70/126 (55%)
Frame = -2
Query: 523 DEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 344
+++ KI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 343 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 164
+ K +T+P ++ GK G+ T+ + PA GTG+++ +++L++ GV D
Sbjct: 71 KISL--------KNNTIPHEIAGKWGATTLWMAPAYEGTGVIAGSASREILELVGVHDIL 122
Query: 163 TSARGS 146
T +GS
Sbjct: 123 TKIKGS 128
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 79.4 bits (187), Expect = 1e-13
Identities = 46/128 (35%), Positives = 72/128 (56%)
Frame = -2
Query: 529 LNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 350
L + V + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 349 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 170
++ V +G T+P ++ G+ GS V + PA GTG++S + +L++AGV D
Sbjct: 72 LISV------PIVGT--TIPHEIHGQFGSGNVLMKPAAEGTGVISGGPVRAILELAGVGD 123
Query: 169 CYTSARGS 146
T + GS
Sbjct: 124 ILTKSLGS 131
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 78.6 bits (185), Expect = 2e-13
Identities = 43/137 (31%), Positives = 74/137 (54%)
Frame = -2
Query: 538 GPSLNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 359
GP ++V ++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 358 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAG 179
K + + V I K +++P ++ + G+ +V + PA GTG+V+ + +L++AG
Sbjct: 128 KKTAITV-------PITKDYSLPHRLDVEWGAASVMMKPASVGTGLVAGGAVRTILELAG 180
Query: 178 VQDCYTSARGSTGTLGN 128
Q+ G+ L N
Sbjct: 181 YQNARGKQLGTDNALNN 197
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 77.4 bits (182), Expect = 4e-13
Identities = 44/132 (33%), Positives = 72/132 (54%)
Frame = -2
Query: 529 LNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 350
L +++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 349 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 170
+ V K+ K T+ +V GK G+ V + PAP+GTG+++ K +L++ G +D
Sbjct: 138 MYKV-------KMNKNFTLYHEVIGKHGAGKVLIKPAPKGTGVIAGGPIKVVLELCGFKD 190
Query: 169 CYTSARGSTGTL 134
Y+ G +L
Sbjct: 191 VYSKNLGKNTSL 202
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 74.5 bits (175), Expect = 3e-12
Identities = 44/128 (34%), Positives = 69/128 (53%)
Frame = -2
Query: 526 NDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 347
+++V KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 346 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDC 167
+ + K HT+P +V GK S V L P+ GTGI++ + +++ AG+QD
Sbjct: 91 VKINF--------KGHTIPHEVIGKFKSARVILKPSTAGTGIIAGASVRSIVEKAGIQDV 142
Query: 166 YTSARGST 143
T + GS+
Sbjct: 143 LTKSWGSS 150
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 73.3 bits (172), Expect = 6e-12
Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Frame = -2
Query: 523 DEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV- 347
+++ +I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK ++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 346 -LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 170
+PV G T+P +V G+ + V L PA GTGI++ + ++++AG+Q+
Sbjct: 77 EVPVING----------TIPHEVIGRQDASKVLLKPAAPGTGIIAGGTVRAVVELAGIQN 126
Query: 169 CYTSARGSTGTL 134
T + GST L
Sbjct: 127 ILTKSLGSTNPL 138
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 72.9 bits (171), Expect = 8e-12
Identities = 41/84 (48%), Positives = 53/84 (63%)
Frame = -2
Query: 613 KIDKLESIYLFSLPIKEFEIIDFFLGPSLNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDN 434
KI L+ +YLFS PIKEFE+ DF L L D+V K+M V+KQ AG+ RFK V I
Sbjct: 2 KIKSLK-VYLFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYC 60
Query: 433 NGHIGLGVKCSKEVATAIRGAIIL 362
N ++ LGV+ KE+ A+ IIL
Sbjct: 61 NDNVSLGVERPKELLIAVCRTIIL 84
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 72.9 bits (171), Expect = 8e-12
Identities = 40/132 (30%), Positives = 71/132 (53%)
Frame = -2
Query: 523 DEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 344
+ V ++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 343 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 164
V + K T P + G G+ V L PA GTG+++ + +L+MAGV++
Sbjct: 209 QV-------PMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENAL 261
Query: 163 TSARGSTGTLGN 128
GS L N
Sbjct: 262 GKQLGSNNALNN 273
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 71.7 bits (168), Expect = 2e-11
Identities = 36/132 (27%), Positives = 73/132 (55%)
Frame = -2
Query: 523 DEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 344
+ V +I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 343 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 164
V + K +++P ++G G+ V L PA GTG+++ + +L++AG+++
Sbjct: 128 RV-------PLNKINSIPHPMSGSSGAANVFLKPASGGTGVIAGGAVRTVLELAGIKNVL 180
Query: 163 TSARGSTGTLGN 128
+ GS L N
Sbjct: 181 AKSLGSKSPLNN 192
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 71.3 bits (167), Expect = 3e-11
Identities = 41/141 (29%), Positives = 73/141 (51%)
Frame = -2
Query: 550 DFFLGPSLNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 371
DF G + + + ++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 370 IILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLL 191
++ AK SV+ V + T+P +V K + ++PA GTG+++ + +L
Sbjct: 566 LVDAKKSVVRV-------PLVGAGTIPHRVEAKFNAARCVMVPAADGTGVLAGSSIRSVL 618
Query: 190 QMAGVQDCYTSARGSTGTLGN 128
++AGVQ+ G L N
Sbjct: 619 ELAGVQNVLAKRIGCRSLLNN 639
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 70.1 bits (164), Expect = 6e-11
Identities = 42/132 (31%), Positives = 68/132 (51%)
Frame = -2
Query: 544 FLGPSLNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 365
F ++V I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 364 LAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 185
AK +++ V + TVP +V G G+ V + PA GTG+++ + ++++
Sbjct: 98 EAKKNLIRVPL--------RGTTVPHEVIGHFGAGQVLIKPAKPGTGVIAGGPARAVIEL 149
Query: 184 AGVQDCYTSARG 149
AG+ D Y + G
Sbjct: 150 AGIADVYAKSLG 161
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 69.7 bits (163), Expect = 8e-11
Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Frame = -2
Query: 493 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL--PVRRGYWG 320
K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++ PV G
Sbjct: 29 KTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMITVPVENG--- 85
Query: 319 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 146
T+P ++ G+ + V L PA GTG+++ VP+ + ++AG+ + + GS
Sbjct: 86 -------TIPHEIVGENSTSRVLLKPAGPGTGVIAGTVPRSIAELAGITNMLSKELGS 136
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 69.7 bits (163), Expect = 8e-11
Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 2/117 (1%)
Frame = -2
Query: 487 TRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL--PVRRGYWGNK 314
T+ G+R F V +GD GH+G G +KEV AI I AK +V+ P+ G
Sbjct: 42 TKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKNVIRVPIVDG----- 96
Query: 313 IGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 143
TVP V G G+ + ++PA RGTG+V+ K + ++AG D T GST
Sbjct: 97 -----TVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGST 148
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 69.3 bits (162), Expect = 1e-10
Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Frame = -2
Query: 535 PSLNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 356
P L ++V KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 355 LSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVS-APVPKKLLQMAG 179
+ VR G T+P G+ G+ L PA +GTGIV+ + +L++ G
Sbjct: 73 KQL--VRIPITGT------TIPHDTIGRFGASKFFLKPASKGTGIVAGGKAARTILELVG 124
Query: 178 VQDCYTSARGS 146
+ D T GS
Sbjct: 125 INDVLTKTFGS 135
>UniRef50_Q50301 Cluster: 30S ribosomal protein S5; n=2;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
pneumoniae
Length = 219
Score = 68.5 bits (160), Expect = 2e-10
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Frame = -2
Query: 523 DEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA--KLS 350
+ + K+ + K T+ G+ RF V +G+ G IG G+ + EV AI+ AI A L
Sbjct: 68 ERIVKLKRISKTTKGGRNMRFSVLVVVGNRKGKIGYGIAKALEVPNAIKKAIKAAHNSLH 127
Query: 349 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 170
+ + +G ++ +V G+ G+ V L PAP+GTGI++ + ++++AG D
Sbjct: 128 TIEIHKG----------SIYHEVIGRSGASRVLLKPAPQGTGIIAGGAIRAIIELAGYSD 177
Query: 169 CYTSARG 149
YT G
Sbjct: 178 IYTKNLG 184
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 67.3 bits (157), Expect = 4e-10
Identities = 39/132 (29%), Positives = 68/132 (51%)
Frame = -2
Query: 523 DEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 344
+ V ++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 343 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 164
V + K T P + G G+ V L PA GTG+++ + +L+MAGV++
Sbjct: 246 TV-------PMTKYLTFPHRADGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENAL 298
Query: 163 TSARGSTGTLGN 128
S L N
Sbjct: 299 GKQIRSKNALNN 310
>UniRef50_UPI0001553406 Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 208
Score = 66.5 bits (155), Expect = 7e-10
Identities = 38/77 (49%), Positives = 47/77 (61%)
Frame = +3
Query: 126 KFPKVPVEPRAEV*QSCTPAI*RSFLGTGADTIPVPRGAGISRTVTEPHLPVTLQGTVCG 305
K PKV V+P A V QS P+ FLGT A+ +PVP GAG+ T TEP P+TL G +CG
Sbjct: 12 KSPKVAVQPLAHVQQSSIPSSSSHFLGTEAEVMPVPMGAGMKSTRTEPQWPITLCG-LCG 70
Query: 306 FPILLPQ*PLRTGKTDN 356
LLP P+ + DN
Sbjct: 71 ACCLLP--PVASTHRDN 85
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 66.5 bits (155), Expect = 7e-10
Identities = 37/132 (28%), Positives = 70/132 (53%)
Frame = -2
Query: 523 DEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 344
+ + KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A + +++
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKAKTDGRKNLI 87
Query: 343 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 164
V I K ++P V G G+ + + P+ G+G+++ + +L++AG+++
Sbjct: 88 DV-------PITKSLSIPHAVIGDLGACKIIMRPSIEGSGVIAGGAVRTVLEVAGIKNVI 140
Query: 163 TSARGSTGTLGN 128
GS L N
Sbjct: 141 AKQLGSDNLLNN 152
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 62.5 bits (145), Expect = 1e-08
Identities = 43/131 (32%), Positives = 62/131 (47%)
Frame = -2
Query: 538 GPSLNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 359
G L D V I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 358 KLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAG 179
K + V R T+ V G + TV L PA GTG+++ + +++ AG
Sbjct: 102 KKHMFSVPR--------VRGTITHPVQGHDAAGTVLLRPAAPGTGVIAGGSVRAVMECAG 153
Query: 178 VQDCYTSARGS 146
+ D T + GS
Sbjct: 154 ITDVLTKSMGS 164
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 62.1 bits (144), Expect = 2e-08
Identities = 43/130 (33%), Positives = 62/130 (47%)
Frame = -2
Query: 523 DEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 344
+ V I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 343 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 164
V IG T P V G+ + V L PA GTG+++ + +L+ AGV D
Sbjct: 104 RV------PLIGGTITHP--VQGEAAAGVVLLRPASPGTGVIAGGAARAVLECAGVHDIL 155
Query: 163 TSARGSTGTL 134
+ GS +
Sbjct: 156 AKSLGSDNAI 165
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 61.3 bits (142), Expect = 3e-08
Identities = 35/132 (26%), Positives = 65/132 (49%)
Frame = -2
Query: 523 DEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 344
+ V +I V K + G++ F+A V +G+ G +G+GV + +V A+R + K ++
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 343 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 164
V + K +++ G G V + PA GTG+++ + +L++AGV++
Sbjct: 79 EV-------PLTKSNSITHITNGVSGGAKVVVRPAAPGTGVIAGGAVRTVLELAGVKNIL 131
Query: 163 TSARGSTGTLGN 128
GS L N
Sbjct: 132 AKQLGSNNPLNN 143
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 60.1 bits (139), Expect = 6e-08
Identities = 39/126 (30%), Positives = 65/126 (51%)
Frame = -2
Query: 523 DEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 344
+++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 343 PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCY 164
V I TVP + K + V L PAP+G GI+++ + ++++AG D Y
Sbjct: 151 RV-------PIINKSTVPHEQWAKFLASKVMLKPAPKGKGIIASNSVRAVVELAGYTDIY 203
Query: 163 TSARGS 146
T + GS
Sbjct: 204 TKSYGS 209
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 59.3 bits (137), Expect = 1e-07
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 2/134 (1%)
Frame = -2
Query: 538 GPSLNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 359
G L +++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 358 KLSVL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQM 185
K +++ P+R G + G+ G+ G+ V L AP GTGI++ + + +
Sbjct: 116 KKTMIRVPLREGRTLHHDGR---------GRFGAGLVYLRSAPSGTGIIAGGPMRAIFES 166
Query: 184 AGVQDCYTSARGST 143
GV D T + G++
Sbjct: 167 LGVADVVTKSVGTS 180
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 59.3 bits (137), Expect = 1e-07
Identities = 40/128 (31%), Positives = 63/128 (49%)
Frame = -2
Query: 529 LNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 350
L +++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERARKD 75
Query: 349 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 170
+ V + PH +V G G+ V L PA GTG+++ + +L+ AGV +
Sbjct: 76 MALVSL----TDVSIPH----QVIGHYGAGRVFLRPASAGTGLIAGGPVRAVLEAAGVSN 127
Query: 169 CYTSARGS 146
T GS
Sbjct: 128 ILTKCLGS 135
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = -2
Query: 673 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFSLPIK 566
K + KEW+PVTKLGRLV++ KI LE IYLFSLPIK
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIK 89
Score = 35.1 bits (77), Expect = 2.0
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2
Query: 82 LTPDLWRDIPLTKSPYSEF 26
LTPDLW++ TKSPY EF
Sbjct: 139 LTPDLWKETVFTKSPYQEF 157
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 57.6 bits (133), Expect = 3e-07
Identities = 37/128 (28%), Positives = 62/128 (48%)
Frame = -2
Query: 526 NDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 347
++ V I K + G+ F A V +GD G +G G + EV+ AIR A+ ++
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIRKGGEAARRNL 75
Query: 346 LPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDC 167
+ V T+P +V K G V L PA GTG+++ + +L++AGV+D
Sbjct: 76 VTVPM--------HGQTLPHEVEVKFGGARVLLRPASAGTGLIAGGAVRAILELAGVEDV 127
Query: 166 YTSARGST 143
+ G++
Sbjct: 128 LAKSLGAS 135
>UniRef50_Q7UN03 Cluster: 30S ribosomal protein S5; n=3;
Bacteria|Rep: 30S ribosomal protein S5 - Rhodopirellula
baltica
Length = 177
Score = 57.6 bits (133), Expect = 3e-07
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Frame = -2
Query: 541 LGPSLNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 362
L L D V KI + G+R F A V +G+ +G +G G + EV +++ A
Sbjct: 17 LEAGLLDRVVKIKRCAAVVKGGRRFSFAAMVVVGNGSGQVGWGYGKANEVPPSVQKAQKQ 76
Query: 361 AKLSVL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQ 188
A S++ P+ G ++P +V G+ G+ V LIPA GTGI++ + + +
Sbjct: 77 ASRSMIHVPLVEG----------SIPHQVWGRYGAARVVLIPAGAGTGIIAGQAVRAVCE 126
Query: 187 MAGVQDCYTSARGS 146
G+ D T + G+
Sbjct: 127 ACGIHDILTKSYGT 140
>UniRef50_Q7MTN0 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Porphyromonas
gingivalis (Bacteroides gingivalis)
Length = 172
Score = 57.6 bits (133), Expect = 3e-07
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Frame = -2
Query: 529 LNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 350
L D + I V K T+ G+ F A V +G+ +G IG G+ + EV AI + AK +
Sbjct: 16 LKDRLVAINRVTKVTKGGRTFTFAAIVVVGNEDGVIGWGLGKAGEVPAAIAKGVEAAKKN 75
Query: 349 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 176
++ PV G T+P + G +V L PA GTG+ + + +L GV
Sbjct: 76 LIRVPVHNG----------TIPHEQAASYGGASVFLKPATTGTGVKAGGAMRAVLDSVGV 125
Query: 175 QDCYTSARGST 143
D ++GS+
Sbjct: 126 TDVLAKSKGSS 136
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 57.2 bits (132), Expect = 4e-07
Identities = 39/128 (30%), Positives = 62/128 (48%)
Frame = -2
Query: 529 LNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 350
L ++V I K + G+R F A +GD NG +G+G + EV AI+ A+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIKKGTENARKR 130
Query: 349 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 170
++ V K T+P +V G V L PA GTG+++ + +L+ AGV++
Sbjct: 131 MVSVTL--------KGDTIPHEVFGTHDGGKVLLRPAVTGTGLIAGGAVRAVLEAAGVKN 182
Query: 169 CYTSARGS 146
T + GS
Sbjct: 183 VLTKSMGS 190
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 56.4 bits (130), Expect = 8e-07
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = -2
Query: 655 WVPVTKLGRLVREGKIDKLESIYLFSLPIKEFEIIDFF 542
W PVTKLGRLV++GK+ ++ I+ F + IKEFEI+D F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEFGIKIKEFEIVDHF 72
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 56.4 bits (130), Expect = 8e-07
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 2/129 (1%)
Frame = -2
Query: 523 DEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 350
D++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 349 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 170
+P+R G T+ V G+ G+ V L A GTGI++ + + + GV D
Sbjct: 84 FVPLRGG---------RTLHHDVHGRHGAGKVLLRSAKPGTGIIAGGPMRAVFETLGVHD 134
Query: 169 CYTSARGST 143
+ GS+
Sbjct: 135 VVAKSTGSS 143
>UniRef50_Q2GEC2 Cluster: 30S ribosomal protein S5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S5 - Neorickettsia sennetsu (strain Miyayama)
Length = 172
Score = 54.4 bits (125), Expect = 3e-06
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 2/131 (1%)
Frame = -2
Query: 529 LNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 350
L + V I V K T+ G++ F+ +GD G +G EV A A+ AK +
Sbjct: 11 LFESVVDIARVSKVTKGGRQFSFRVAALVGDKKGCVGYATAKHDEVLDARSKAVRKAKGA 70
Query: 349 VL--PVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGV 176
++ P+R G T+ K G+ + + PAP GTGIV+ +K +M GV
Sbjct: 71 MIRFPLREG---------RTIHHDCFSKLGASKLFIKPAPEGTGIVAGGAMRKFCEMLGV 121
Query: 175 QDCYTSARGST 143
D + GS+
Sbjct: 122 SDIIAKSYGSS 132
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 53.6 bits (123), Expect = 5e-06
Identities = 36/129 (27%), Positives = 63/129 (48%)
Frame = -2
Query: 529 LNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 350
L +++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 349 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 170
++ V N I T+ V G+ G+ V + PA GTGI++ + + ++ GV +
Sbjct: 81 MVRV------NLIN--GTLHHSVIGRHGAARVYMQPASEGTGIIAGGPMRAIFEVMGVHN 132
Query: 169 CYTSARGST 143
GST
Sbjct: 133 ILAKCLGST 141
>UniRef50_A0CLK5 Cluster: Chromosome undetermined scaffold_20, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_20,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 337
Score = 53.2 bits (122), Expect = 7e-06
Identities = 29/104 (27%), Positives = 47/104 (45%)
Frame = -2
Query: 463 FKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPHTVPCK 284
F+ + IG+ NG IG G K+ TA+R A + A+ +++P+ W HT P
Sbjct: 187 FRQLIFIGNGNGVIGYGKGKGKDFETALRRAKVDAQRNLVPISLDLW-------HTCPIP 239
Query: 283 VTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSAR 152
+TG+ + + P P G P +L + G+ C R
Sbjct: 240 LTGRFNDAEIEINPRPLGFNAYGNPQIASMLMLTGIHHCSFKVR 283
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 53.2 bits (122), Expect = 7e-06
Identities = 37/132 (28%), Positives = 63/132 (47%)
Frame = -2
Query: 529 LNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 350
L ++V + K + G++ F A + +GD G +G G + E+ AIR A+ +
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKN 72
Query: 349 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 170
++ + G+ I PH V G + L PA GTGIV+ + +L+MAGV++
Sbjct: 73 LITI-ESLEGDSI--PHEVLVDQDG----AQLLLKPAKPGTGIVAGSRIRLILEMAGVKN 125
Query: 169 CYTSARGSTGTL 134
+ GS +
Sbjct: 126 IVAKSLGSNNPM 137
>UniRef50_Q4FLN5 Cluster: 30S ribosomal protein S5; n=4;
Rickettsiales|Rep: 30S ribosomal protein S5 -
Pelagibacter ubique
Length = 170
Score = 52.4 bits (120), Expect = 1e-05
Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Frame = -2
Query: 523 DEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 350
+++ I + K + G+R F A V +G+ G IG+ +K+V AI+ A A+ L
Sbjct: 13 EKLVHINRITKVVKGGRRFGFSALVVVGNQAGKIGVAHAKAKQVPDAIKKANETARRVLI 72
Query: 349 VLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 170
+P+R G T+ V GK G+ + L AP+GTGI++ + + ++ G++D
Sbjct: 73 HVPLREG---------RTIHHDVYGKDGAGKIILRSAPKGTGIIAGGPVRAVCEVLGIKD 123
Query: 169 CYTSARGST 143
+ G++
Sbjct: 124 IVAKSMGTS 132
>UniRef50_A4S3U8 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 148
Score = 52.0 bits (119), Expect = 2e-05
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Frame = -2
Query: 493 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNK 314
K T+ G T F A V +G+ +G IG +V AI A A S+ V+R
Sbjct: 12 KVTKGGDLTNFTAMVVVGNGDGVIGFATGKGADVGMAIDKAYRKAARSLTYVQRF----- 66
Query: 313 IGKPHTVPCKVTGK-CGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 146
+ HT+ +V GK C ++ V ++PAP G GIV+ + + +AG+++ GS
Sbjct: 67 --EDHTIYHEVRGKYCKTICV-MLPAPSGDGIVANDTVEAICTLAGIKNIKAKIHGS 120
>UniRef50_Q8TGP1 Cluster: Uncharacterized protein YGL123C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YGL123C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 76
Score = 50.8 bits (116), Expect = 4e-05
Identities = 30/54 (55%), Positives = 35/54 (64%)
Frame = +3
Query: 507 IFXTSSFRDGPRKKSMISNSLIGKENK*MLSSLSIFPSRTRRPSLVTGTHSFWS 668
+F TSS + G K SMI NSL GKE K + S + I P+ T PSLVTGTH F S
Sbjct: 1 MFMTSSCKPG-NKVSMIWNSLTGKECKKISSMVVILPALTNLPSLVTGTHPFSS 53
>UniRef50_A3BJ14 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 163
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/36 (55%), Positives = 29/36 (80%)
Frame = -2
Query: 232 GTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNF 125
G+ +V+ VPKK+L+ AG++D +TS+RGST TL NF
Sbjct: 2 GSSVVATRVPKKVLKFAGIEDVFTSSRGSTKTLSNF 37
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 48.4 bits (110), Expect = 2e-04
Identities = 34/125 (27%), Positives = 58/125 (46%)
Frame = -2
Query: 517 VXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 338
+ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
Query: 337 RRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTS 158
+ + T+ + K S V L A GTGI++ + + ++ GVQD
Sbjct: 80 H-------LRESRTLHHDIQAKFCSSKVMLRSAKVGTGIIAGGSIRLIFEVLGVQDVVAK 132
Query: 157 ARGST 143
+ GS+
Sbjct: 133 SIGSS 137
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 45.6 bits (103), Expect = 0.001
Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = -2
Query: 499 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYW 323
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR +
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR--Y 406
Query: 322 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 170
N+ T+ VT K V L+ P G G+ ++ + AG+ D
Sbjct: 407 ENR-----TIYGNVTSKISGTVVELMARPPGFGLRCPHRIFEMCRAAGIHD 452
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 44.8 bits (101), Expect = 0.003
Identities = 33/113 (29%), Positives = 54/113 (47%)
Frame = -2
Query: 508 IMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 329
I V QTR G+ G+ NG +G+G+ S E+ A + A A ++ PV R
Sbjct: 262 IRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVKNMQPVPR- 320
Query: 328 YWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 170
Y + T+ V GK G+V ++L+ P G G+ + ++ + AG+ D
Sbjct: 321 Y------EKRTIFGDVEGKVGAVQLKLMHRPPGFGLRCQHLIFEMCRAAGIHD 367
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 44.0 bits (99), Expect = 0.004
Identities = 33/110 (30%), Positives = 55/110 (50%)
Frame = -2
Query: 499 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 320
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R +
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR--YE 380
Query: 319 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 170
N+ T+ +VT K VRL P G G+ + ++ + AG++D
Sbjct: 381 NR-----TIYGEVTTKVSGTIVRLNSRPPGFGLRVSHRIFEMCRAAGIRD 425
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 44.0 bits (99), Expect = 0.004
Identities = 32/114 (28%), Positives = 55/114 (48%)
Frame = -2
Query: 499 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 320
V QTR G+ + +G+ NG IGLG S + A+ A ++A +++P+RR Y
Sbjct: 260 VTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKNMVPIRR-Y-- 316
Query: 319 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTS 158
+ T+ KV K V + P G G+ + ++ ++AG++D S
Sbjct: 317 ----EDRTIYGKVKVKIAGTVVEMAARPPGFGLRISHRLFEICRLAGIKDLSAS 366
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 43.2 bits (97), Expect = 0.008
Identities = 32/110 (29%), Positives = 53/110 (48%)
Frame = -2
Query: 499 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 320
V QTR G+ + +G+ NG +G+G S E + A A +LA ++ P+RR Y
Sbjct: 253 VANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIRNMRPIRR-Y-- 309
Query: 319 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 170
+ T+ VT K V++ P G G+ + ++ + AG+QD
Sbjct: 310 ----EDRTIYGSVTAKVSGTVVKMNARPPGFGLRVSHRIFEMCRAAGIQD 355
>UniRef50_UPI0000DA3DCA Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Rattus norvegicus
Length = 68
Score = 41.9 bits (94), Expect = 0.018
Identities = 24/64 (37%), Positives = 32/64 (50%)
Frame = -2
Query: 235 RGTGIVSAPVPKKLLQMAGVQDCYTSARGSTGTLGNFXXXXXXXXXXXXXYLTPDLWRDI 56
RG + + + KKLL +A +QDCY AR + LGN+ YLT DLW +
Sbjct: 6 RGRAVFTTVLKKKLL-LASIQDCYMIARVHSLMLGNYAKATFYVFSMTSNYLTFDLWTEN 64
Query: 55 PLTK 44
TK
Sbjct: 65 VCTK 68
>UniRef50_Q6CAL1 Cluster: Similar to sp|P33759 Saccharomyces
cerevisiae YBR251w MRPS5 ribosomal protein S5; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P33759
Saccharomyces cerevisiae YBR251w MRPS5 ribosomal protein
S5 - Yarrowia lipolytica (Candida lipolytica)
Length = 312
Score = 41.9 bits (94), Expect = 0.018
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Frame = -2
Query: 499 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAIRGAIILAKLSVLPVRRGYW 323
V+ QT G++ +F VA GD G +GLG K A+ A+ A S+ V R +
Sbjct: 157 VKSQTGKGKKMQFCVLVATGDGKGMLGLGEGKDPLSFPVALEKAMWKATRSMKMVPR--Y 214
Query: 322 GNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGST 143
N+ T+ +V K +V + + AP G G+ P+ ++ M G+ D + GS
Sbjct: 215 QNR-----TIYGEVYKKFHAVHLTMRSAPAGHGLRVNPIVSQMCSMVGITDMTCNVYGSR 269
Query: 142 GTL 134
L
Sbjct: 270 NPL 272
>UniRef50_Q7R438 Cluster: GLP_254_52826_53383; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_52826_53383 - Giardia lamblia
ATCC 50803
Length = 185
Score = 40.7 bits (91), Expect = 0.041
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +2
Query: 428 TVVVANGNKCLETCALSGTCLFLYRHDLXNLIIQ-GRAEEEINDLEFFDW*RKQVNALEF 604
+V V + + E L G L L RHD+ +L+ + +E +NDL D R N ++
Sbjct: 44 SVTVPDYHMSTEPRTLPGCGLLLDRHDIAHLLRKLALRKEVVNDLCLLDGERILENVIKG 103
Query: 605 VDFSFANKTAEFGDRNPLFLVFL 673
+ S ++ AEF R PLFL+ L
Sbjct: 104 LYLSCLHQAAEFRGRMPLFLLHL 126
>UniRef50_Q4PBG0 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 375
Score = 39.5 bits (88), Expect = 0.095
Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
Frame = -2
Query: 499 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA--KLSVLPVRRGY 326
V T G+ A V G+ G +G G + A R A A L + + +G
Sbjct: 200 VVHMTTKGKDASMYALVIAGNGKGLVGYGEGKDTNASKAGRKAFNAAVKNLDSVAIHKGS 259
Query: 325 WGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 146
G++ TV ++ K G+ V L P P G G+ PV + + G+ D S GS
Sbjct: 260 DGSR-----TVETQLEAKWGASRVVLRPRPAGFGLRVPPVIHAICRSVGITDLSASIYGS 314
Query: 145 T 143
T
Sbjct: 315 T 315
>UniRef50_UPI00015B5E49 Cluster: PREDICTED: similar to 28S ribosomal
protein S5; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to 28S ribosomal protein S5 - Nasonia
vitripennis
Length = 405
Score = 39.1 bits (87), Expect = 0.12
Identities = 30/111 (27%), Positives = 50/111 (45%)
Frame = -2
Query: 478 GQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIGKPH 299
G++ + +FV G+ NG G+ + S E TA+R A A ++ V + K H
Sbjct: 162 GRKRSYSSFVITGNKNGLCGIALGKSAEGRTALRLARNRAGFKLMHV-------PLYKNH 214
Query: 298 TVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQDCYTSARGS 146
TV + GS + + P G G+V K ++ G++D + GS
Sbjct: 215 TVFHDFFTQFGSTKLFVTKKPEGYGLVCHRAIKCACEVIGIKDLHVKVEGS 265
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.50
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +2
Query: 368 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 466
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_A6S1U3 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 411
Score = 34.7 bits (76), Expect = 2.7
Identities = 29/110 (26%), Positives = 46/110 (41%)
Frame = -2
Query: 499 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWG 320
V QTR G+ G+ G +G+G +E A I A ++ PV R Y
Sbjct: 258 VVNQTRLGKIDSMYVLAIAGNGRGRLGIGEAKGQEPEDTNNNAKIAAIKNMQPVPR-Y-- 314
Query: 319 NKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKKLLQMAGVQD 170
+ T+ V GK +V V+L+ P G G+ + + + G+ D
Sbjct: 315 ----EERTIYGDVEGKVSAVEVKLMARPPGFGLRCQKLIFDMAKAVGIHD 360
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.3 bits (75), Expect = 3.6
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -2
Query: 499 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 380
V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 154 VSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Molybdenum
cofactor synthesis-like - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 33.9 bits (74), Expect = 4.7
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Frame = +2
Query: 482 TCLFLYR-HDLXNLIIQGRAEEEIND-LEFFDW*RKQVNALEFVDFSFANKT 631
TCLF R HDL +LI++G ++EEI D + + ++Q + + DF A++T
Sbjct: 281 TCLFSVREHDLASLILEGASDEEIADRIRYAVENKEQRHHIGEADFMPASRT 332
>UniRef50_Q2JDT3 Cluster: Exodeoxyribonuclease III; n=30;
Bacteria|Rep: Exodeoxyribonuclease III - Frankia sp.
(strain CcI3)
Length = 304
Score = 33.5 bits (73), Expect = 6.2
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = -2
Query: 376 GAIILAKLSVLPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRLIPAPRGTGIVSAPVPKK 197
G IL++ ++ V RG G+ G P P + CG + + + P G I K
Sbjct: 74 GVAILSRDTLDDVARGLPGDP-GFPGPEPRAIAATCGGIRIWSLYVPNGRTIDDPHYAYK 132
Query: 196 LLQMAGVQDCYTSA--RGSTGTLGNF 125
L +A +++ A +G+ TLG+F
Sbjct: 133 LAWLAALREVVAEATTQGAVMTLGDF 158
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 33.5 bits (73), Expect = 6.2
Identities = 21/66 (31%), Positives = 36/66 (54%)
Frame = -2
Query: 541 LGPSLNDEVXKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 362
L ++ +++ +I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 361 AKLSVL 344
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_Q9RS86 Cluster: Ribosomal protein S2-related protein; n=5;
Bacteria|Rep: Ribosomal protein S2-related protein -
Deinococcus radiodurans
Length = 472
Score = 33.1 bits (72), Expect = 8.2
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -2
Query: 460 KAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGYWGNKIG 308
++ V IG + H G + +++VA A+RG + L V GYW + G
Sbjct: 2 RSLVLIGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPG 52
>UniRef50_A4MJQ3 Cluster: Heat shock protein DnaJ domain protein;
n=1; Geobacter bemidjiensis Bem|Rep: Heat shock protein
DnaJ domain protein - Geobacter bemidjiensis Bem
Length = 441
Score = 33.1 bits (72), Expect = 8.2
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Frame = +2
Query: 188 LKKLLRNWRRHNSSTTRGRNQPDCYRTTLAGDLARDGVWLSDL---VTPVTSSNW*NRQL 358
L+++LR+WRRH+ N + ++A + + DL V + SS +L
Sbjct: 161 LREILRSWRRHHPERQPESNDTKAELARVKREIAVEAQAVHDLSAQVEQLRSSYVCRFKL 220
Query: 359 SKDNSASNGSGDFLAALHTQTNMTVVVA 442
DNS + GS D A + +M VV A
Sbjct: 221 RVDNSLAEGS-DLFAEMIAAADMNVVRA 247
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 777,584,111
Number of Sequences: 1657284
Number of extensions: 17120486
Number of successful extensions: 47013
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 44774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46919
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67496806780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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