Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_B05
(690 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21324-8|AAA62561.1| 190|Caenorhabditis elegans Hypothetical pr... 64 9e-11
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 30 1.4
AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical... 30 1.8
Z81497-6|CAB04082.2| 604|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z75953-5|CAB00102.2| 604|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z72506-5|CAA96616.2| 259|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical p... 29 3.1
Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical p... 28 5.5
U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of c... 28 5.5
U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of c... 28 5.5
AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding p... 28 5.5
AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich ... 28 5.5
>U21324-8|AAA62561.1| 190|Caenorhabditis elegans Hypothetical
protein C35D10.5 protein.
Length = 190
Score = 64.1 bits (149), Expect = 9e-11
Identities = 42/178 (23%), Positives = 87/178 (48%), Gaps = 9/178 (5%)
Frame = -3
Query: 571 LYESIHANIVYEEWFEKLELPDTLASWFSITELHVWLLMVRYMAEDIAHTAKEKKTYVKG 392
LY + N + + E L D ++SW+ +T +H W++++R H+ + K Y++
Sbjct: 23 LYYNCADNYDFAKLCEAFGLGDYMSSWYKLTLMHTWMVLMR------LHSEFDGKAYMR- 75
Query: 391 DGHFVRNCIVEALWADVSSRIKLLEGANPSI--AKKQVSELSEQFQAALVAYDEG-LSDD 221
++ ++ +W D+ +R+ ++ I + + + YDEG L DD
Sbjct: 76 ----LQRGLLSTMWLDIDNRLGIVSKELNQIMTGQNDMKHMHGLHLQTFFEYDEGFLHDD 131
Query: 220 KILAAAIWRRFYSLSENTDVENVEKIVSFIRRQILILDKISSEEL------KWKPERP 65
++LA AIWR Y ++ D ++ K+V+++R + L+ + ++ +WK RP
Sbjct: 132 RVLAGAIWRCLY-MNREVDPIHLLKVVTYMRSTVAWLETQDTNQILVEGISEWKQLRP 188
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -3
Query: 175 ENTDVENVEKIVSFIRRQILILDKISSEELKW 80
E TD+++ + +VS R + LDKI + L+W
Sbjct: 241 EETDIQHADILVSTPNRIVFHLDKIDTSSLRW 272
>AC024798-12|AAK29920.2| 1725|Caenorhabditis elegans Hypothetical
protein Y48G9A.1 protein.
Length = 1725
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -3
Query: 247 AYDEGLSDDKILAAAIWRRFYSLSENTDVE-NVEKIVSFIRRQIL 116
A+++ LS+ + +AA I YSL+EN D+E + +V ++R +L
Sbjct: 683 AFEDRLSETRRVAAQIISNIYSLTENKDMEPYLAHMVPGLQRSLL 727
>Z81497-6|CAB04082.2| 604|Caenorhabditis elegans Hypothetical
protein F10C2.3 protein.
Length = 604
Score = 29.5 bits (63), Expect = 2.4
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -3
Query: 652 DSYVKKFMKAVGWMDQDRTRLKLT-GYFLYESIHANIVYEEWFEKLELPDTLASWFSITE 476
D Y + + V W R L G ++ N + + + + P SW +TE
Sbjct: 292 DHYFRPYWLNVYWTYVHRRSRNLCYGNHRMHNLQLNYLSQFVSKYKDQPKFAISW--LTE 349
Query: 475 L-HVWLLMVRYMAEDIAHTAKE 413
L H WL VRY ED+A+ K+
Sbjct: 350 LGHDWLNQVRYGDEDLANFLKK 371
>Z75953-5|CAB00102.2| 604|Caenorhabditis elegans Hypothetical
protein F10C2.3 protein.
Length = 604
Score = 29.5 bits (63), Expect = 2.4
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = -3
Query: 652 DSYVKKFMKAVGWMDQDRTRLKLT-GYFLYESIHANIVYEEWFEKLELPDTLASWFSITE 476
D Y + + V W R L G ++ N + + + + P SW +TE
Sbjct: 292 DHYFRPYWLNVYWTYVHRRSRNLCYGNHRMHNLQLNYLSQFVSKYKDQPKFAISW--LTE 349
Query: 475 L-HVWLLMVRYMAEDIAHTAKE 413
L H WL VRY ED+A+ K+
Sbjct: 350 LGHDWLNQVRYGDEDLANFLKK 371
>Z72506-5|CAA96616.2| 259|Caenorhabditis elegans Hypothetical
protein F07A5.4 protein.
Length = 259
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/33 (39%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Frame = -1
Query: 348 LMFLVG-LSY*RVQIHQLQRNKYQSSLNNFKLP 253
L+F +G + Y +QI++LQ N+++ LN+ +LP
Sbjct: 16 LLFSIGWIFYQNIQINELQINRHKRELNSNRLP 48
>Z98877-12|CAB63409.1| 528|Caenorhabditis elegans Hypothetical
protein Y69H2.12 protein.
Length = 528
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = -3
Query: 370 CIVEALWADVSSRIKLLEGANPSIAKKQVSELSEQFQAALVAYDEGLSDD 221
CI LW D + PS + L+EQ+ A D+G D
Sbjct: 344 CICGPLWTDTDCETPVASACTPSPCWNGICVLNEQYNTYTCACDDGYFGD 393
>Z77663-10|CAB01204.1| 543|Caenorhabditis elegans Hypothetical
protein F53F4.11 protein.
Length = 543
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -3
Query: 535 EWFEKLELPDTLASWFSITELHVWLLMVRYMAEDIAHTAKEKKT 404
EW EK+E+ L T H+ ++ + E IAHT K+K++
Sbjct: 262 EWAEKIEVDHGL------TSAHIAKILTKREVERIAHTYKDKRS 299
>U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of clr
protein 2, isoforma protein.
Length = 559
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 526 EKLELPDTLASWFSITELHVWLLMVRYMAEDI 431
E + LP + SW SITEL++ ++ + EDI
Sbjct: 363 ELVSLPLDMGSWTSITELNLSTNQLKVLPEDI 394
>U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of clr
protein 2, isoformb protein.
Length = 558
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 526 EKLELPDTLASWFSITELHVWLLMVRYMAEDI 431
E + LP + SW SITEL++ ++ + EDI
Sbjct: 362 ELVSLPLDMGSWTSITELNLSTNQLKVLPEDI 393
>AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding
protein SUR-8 protein.
Length = 559
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 526 EKLELPDTLASWFSITELHVWLLMVRYMAEDI 431
E + LP + SW SITEL++ ++ + EDI
Sbjct: 363 ELVSLPLDMGSWTSITELNLSTNQLKVLPEDI 394
>AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich
repeat protein SOC-2 protein.
Length = 559
Score = 28.3 bits (60), Expect = 5.5
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 526 EKLELPDTLASWFSITELHVWLLMVRYMAEDI 431
E + LP + SW SITEL++ ++ + EDI
Sbjct: 363 ELVSLPLDMGSWTSITELNLSTNQLKVLPEDI 394
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,701,184
Number of Sequences: 27780
Number of extensions: 299184
Number of successful extensions: 655
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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