Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_B03
         (329 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VW32 Cluster: CG8756-PA, isoform A; n=26; Endopterygo...    40   0.008
UniRef50_Q6QG23 Cluster: IcmF protein; n=19; Legionella pneumoph...    32   2.1  
UniRef50_A4XHP8 Cluster: PBS lyase HEAT domain protein repeat-co...    32   2.8  
UniRef50_Q95QQ8 Cluster: Lin-12 and glp-1 x-hybridizing protein ...    31   3.7  

>UniRef50_Q9VW32 Cluster: CG8756-PA, isoform A; n=26;
           Endopterygota|Rep: CG8756-PA, isoform A - Drosophila
           melanogaster (Fruit fly)
          Length = 570

 Score = 40.3 bits (90), Expect = 0.008
 Identities = 13/18 (72%), Positives = 15/18 (83%)
 Frame = -1

Query: 308 CLRCPVNYPWLNDPTGDG 255
           C+ CP NYPW+ DPTGDG
Sbjct: 550 CMECPNNYPWILDPTGDG 567


>UniRef50_Q6QG23 Cluster: IcmF protein; n=19; Legionella
           pneumophila|Rep: IcmF protein - Legionella pneumophila
          Length = 973

 Score = 32.3 bits (70), Expect = 2.1
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +1

Query: 97  MTRYTLNLLENIFVR*NCFSYITYYYVFRATTTPNQYQ 210
           + R  L+ L N+ ++  CF Y+T++  F   + P +YQ
Sbjct: 568 LARQDLSQLHNMLIQAYCFDYVTWWQTFMKKSQPLRYQ 605


>UniRef50_A4XHP8 Cluster: PBS lyase HEAT domain protein
           repeat-containing protein; n=1; Caldicellulosiruptor
           saccharolyticus DSM 8903|Rep: PBS lyase HEAT domain
           protein repeat-containing protein - Caldicellulosiruptor
           saccharolyticus (strain ATCC 43494 / DSM 8903)
          Length = 492

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
 Frame = -3

Query: 240 HDLEPHVLY*LILIWCSSCSKYIIVGNVTKAI--LSNEYVFE*VQSVPGHXPARSLS-TY 70
           H  EP V+  LI ++ S+ +K +I  ++ KA+  +  EY  E +  +  H  AR  +  Y
Sbjct: 28  HFKEPVVIDKLIELFISTNNK-MIEEHIAKALKQIGGEYTVEKLLRLLDHDEARVRTFAY 86

Query: 69  PIVCNIGSH 43
            ++C IGSH
Sbjct: 87  EVLCEIGSH 95


>UniRef50_Q95QQ8 Cluster: Lin-12 and glp-1 x-hybridizing protein 1,
            isoform a; n=4; Bilateria|Rep: Lin-12 and glp-1
            x-hybridizing protein 1, isoform a - Caenorhabditis
            elegans
          Length = 1876

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 308  CLRCPVNYPWLNDPTG 261
            CL CP  YPWL +P G
Sbjct: 1858 CLPCPTMYPWLENPAG 1873


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 302,072,980
Number of Sequences: 1657284
Number of extensions: 5148212
Number of successful extensions: 10031
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10029
length of database: 575,637,011
effective HSP length: 86
effective length of database: 433,110,587
effective search space used: 9961543501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)