BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_B03
(329 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT003524-1|AAO39528.1| 541|Drosophila melanogaster RE22242p pro... 44 5e-05
AE014296-3202|AAF49119.2| 541|Drosophila melanogaster CG32209-P... 44 5e-05
DQ665308-1|ABI95428.1| 525|Drosophila melanogaster helmsman pro... 40 6e-04
BT016093-1|AAV36978.1| 525|Drosophila melanogaster LD36620p pro... 40 6e-04
AY118597-1|AAM49966.1| 256|Drosophila melanogaster LP01646p pro... 40 6e-04
AE014296-3201|AAF49122.1| 549|Drosophila melanogaster CG8756-PB... 40 6e-04
AE014296-3200|AAF49121.1| 570|Drosophila melanogaster CG8756-PA... 40 6e-04
AE014296-3199|AAF49123.2| 531|Drosophila melanogaster CG8756-PC... 40 6e-04
AE014296-3198|AAN11656.1| 525|Drosophila melanogaster CG8756-PD... 40 6e-04
BT023159-1|AAY55575.1| 396|Drosophila melanogaster IP10822p pro... 29 1.9
AE013599-2432|AAF57892.1| 397|Drosophila melanogaster CG15918-P... 29 1.9
AY113493-1|AAM29498.1| 486|Drosophila melanogaster RE51076p pro... 28 2.5
AE014298-3198|AAF50937.2| 486|Drosophila melanogaster CG32499-P... 28 2.5
AY118355-1|AAM48384.1| 577|Drosophila melanogaster RE01566p pro... 27 4.3
AE014296-748|AAN11579.1| 167|Drosophila melanogaster CG32254-PA... 27 4.3
AE014134-2762|AAF53561.2| 577|Drosophila melanogaster CG17905-P... 27 4.3
>BT003524-1|AAO39528.1| 541|Drosophila melanogaster RE22242p
protein.
Length = 541
Score = 44.0 bits (99), Expect = 5e-05
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = -1
Query: 308 CLRCPVNYPWLNDPTGDGHY 249
C+RCP NYPW++DPTGDG +
Sbjct: 522 CVRCPNNYPWVSDPTGDGFF 541
>AE014296-3202|AAF49119.2| 541|Drosophila melanogaster CG32209-PB
protein.
Length = 541
Score = 44.0 bits (99), Expect = 5e-05
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = -1
Query: 308 CLRCPVNYPWLNDPTGDGHY 249
C+RCP NYPW++DPTGDG +
Sbjct: 522 CVRCPNNYPWVSDPTGDGFF 541
>DQ665308-1|ABI95428.1| 525|Drosophila melanogaster helmsman
protein.
Length = 525
Score = 40.3 bits (90), Expect = 6e-04
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 308 CLRCPVNYPWLNDPTGDG 255
C+ CP NYPW+ DPTGDG
Sbjct: 505 CMECPNNYPWILDPTGDG 522
>BT016093-1|AAV36978.1| 525|Drosophila melanogaster LD36620p
protein.
Length = 525
Score = 40.3 bits (90), Expect = 6e-04
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 308 CLRCPVNYPWLNDPTGDG 255
C+ CP NYPW+ DPTGDG
Sbjct: 505 CMECPNNYPWILDPTGDG 522
>AY118597-1|AAM49966.1| 256|Drosophila melanogaster LP01646p
protein.
Length = 256
Score = 40.3 bits (90), Expect = 6e-04
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 308 CLRCPVNYPWLNDPTGDG 255
C+ CP NYPW+ DPTGDG
Sbjct: 236 CMECPNNYPWILDPTGDG 253
>AE014296-3201|AAF49122.1| 549|Drosophila melanogaster CG8756-PB,
isoform B protein.
Length = 549
Score = 40.3 bits (90), Expect = 6e-04
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 308 CLRCPVNYPWLNDPTGDG 255
C+ CP NYPW+ DPTGDG
Sbjct: 529 CMECPNNYPWILDPTGDG 546
>AE014296-3200|AAF49121.1| 570|Drosophila melanogaster CG8756-PA,
isoform A protein.
Length = 570
Score = 40.3 bits (90), Expect = 6e-04
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 308 CLRCPVNYPWLNDPTGDG 255
C+ CP NYPW+ DPTGDG
Sbjct: 550 CMECPNNYPWILDPTGDG 567
>AE014296-3199|AAF49123.2| 531|Drosophila melanogaster CG8756-PC,
isoform C protein.
Length = 531
Score = 40.3 bits (90), Expect = 6e-04
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 308 CLRCPVNYPWLNDPTGDG 255
C+ CP NYPW+ DPTGDG
Sbjct: 511 CMECPNNYPWILDPTGDG 528
>AE014296-3198|AAN11656.1| 525|Drosophila melanogaster CG8756-PD,
isoform D protein.
Length = 525
Score = 40.3 bits (90), Expect = 6e-04
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 308 CLRCPVNYPWLNDPTGDG 255
C+ CP NYPW+ DPTGDG
Sbjct: 505 CMECPNNYPWILDPTGDG 522
>BT023159-1|AAY55575.1| 396|Drosophila melanogaster IP10822p
protein.
Length = 396
Score = 28.7 bits (61), Expect = 1.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 308 CLRCPVNYPWLNDPTG 261
C +CP YPWL++P G
Sbjct: 378 CDKCPSVYPWLDNPLG 393
>AE013599-2432|AAF57892.1| 397|Drosophila melanogaster CG15918-PA
protein.
Length = 397
Score = 28.7 bits (61), Expect = 1.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 308 CLRCPVNYPWLNDPTG 261
C +CP YPWL++P G
Sbjct: 379 CDKCPSVYPWLDNPLG 394
>AY113493-1|AAM29498.1| 486|Drosophila melanogaster RE51076p
protein.
Length = 486
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 308 CLRCPVNYPWLNDPTGDG 255
C CP YPWL D G G
Sbjct: 447 CRECPNVYPWLGDAGGTG 464
>AE014298-3198|AAF50937.2| 486|Drosophila melanogaster CG32499-PA
protein.
Length = 486
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 308 CLRCPVNYPWLNDPTGDG 255
C CP YPWL D G G
Sbjct: 447 CRECPNVYPWLGDAGGTG 464
>AY118355-1|AAM48384.1| 577|Drosophila melanogaster RE01566p
protein.
Length = 577
Score = 27.5 bits (58), Expect = 4.3
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 308 CLRCPVNYPWLNDPTG 261
C+ CP YPW+ + G
Sbjct: 560 CMECPAQYPWIRNEFG 575
>AE014296-748|AAN11579.1| 167|Drosophila melanogaster CG32254-PA
protein.
Length = 167
Score = 27.5 bits (58), Expect = 4.3
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = +1
Query: 100 TRYTLNLLENIFVR*NCFSYITYYYVFRATTTPN 201
T + + +F+ +CF+++ Y +F TT P+
Sbjct: 58 TYFDMGQCRQLFIARSCFNFVLYKLLFLPTTAPS 91
>AE014134-2762|AAF53561.2| 577|Drosophila melanogaster CG17905-PA
protein.
Length = 577
Score = 27.5 bits (58), Expect = 4.3
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -1
Query: 308 CLRCPVNYPWLNDPTG 261
C+ CP YPW+ + G
Sbjct: 560 CMECPAQYPWIRNEFG 575
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,376,286
Number of Sequences: 53049
Number of extensions: 233959
Number of successful extensions: 447
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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