Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_A24
         (733 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0495 + 22705697-22705765,22705903-22706025,22708429-227085...    31   0.71 
02_02_0081 - 6608901-6609680,6610380-6610808,6610893-6610994,661...    30   1.6  
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43...    29   5.0  

>01_05_0495 + 22705697-22705765,22705903-22706025,22708429-22708586,
            22709162-22709206,22709367-22709445,22709522-22709595,
            22709703-22709809,22711116-22711301,22711882-22711920,
            22712020-22712086,22712207-22712281,22713113-22713347,
            22713425-22713755,22714530-22714710,22714810-22714950,
            22715041-22715302,22715503-22715892,22717179-22717735,
            22718421-22718557,22718672-22718853,22718959-22719339,
            22719420-22719545,22719635-22719700,22720056-22721839,
            22721914-22722193,22722386-22722616,22723067-22723588,
            22723683-22723815,22723937-22724193
          Length = 2405

 Score = 31.5 bits (68), Expect = 0.71
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = -1

Query: 358  MVVKLHTFDKLFTLCSRDEHANYSSISTRGTHAYVCVPLVALTEISVLIYNLVLQMLQ 185
            ++ KL  F KL   C   +H +  SIS R     + +PL +L + + LI N+++ + Q
Sbjct: 1752 LLSKLDPFVKLLAECLSSKHESVLSISFRCLALLIKLPLPSLKDNANLIKNVLMDIAQ 1809


>02_02_0081 -
           6608901-6609680,6610380-6610808,6610893-6610994,
           6611114-6611429,6611624-6611806,6611909-6612030,
           6612181-6612251,6612732-6612921
          Length = 730

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
 Frame = -1

Query: 304 EHANYSSISTRGTHAYVCVPLVALTEISVL--IYNLVLQMLQITTKKSQM*LTRQ-PSAI 134
           E   Y   ST GT  Y+         ++ +  IY+L + +LQI T +S M LT    SAI
Sbjct: 583 EATQYRMTSTAGTFCYIDPEYQQTGMLTTMSDIYSLGILLLQIITARSPMGLTHHVESAI 642

Query: 133 LCSTYLNRLD 104
              T+   LD
Sbjct: 643 ERGTFQEVLD 652


>12_01_0053 -
           438527-438670,439038-439247,439401-439530,439672-439842,
           440233-440355,440439-440543,440656-441332,441498-441604,
           441970-442177,442178-442245,444209-444411,444580-444663,
           444780-445109,445238-445438,445667-445744,446236-446306
          Length = 969

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +3

Query: 480 CITCMQL--NVTVFELEQHYCILVETLSSQCPILEDFVTYLHYCS 608
           C+ C +      V +L+ H    V+   +QCP + D++  LH  S
Sbjct: 284 CLACHKKVKGFNVTQLQNHLQGSVKRQGTQCPAINDYILILHQAS 328


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,664,086
Number of Sequences: 37544
Number of extensions: 276267
Number of successful extensions: 408
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)