Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_A18
         (781 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0821 - 27960414-27961253                                         30   1.8  
12_01_0089 - 707260-707317,707626-708050,708663-709621,710223-71...    29   3.1  
11_01_0088 - 662984-663024,663743-663774,664079-664503,665048-66...    29   3.1  
09_02_0409 - 8656136-8656318,8656469-8656609,8658608-8658756,865...    29   4.1  
05_05_0304 - 23965842-23965849,23965940-23966107,23966303-239665...    28   7.2  
03_02_0124 - 5749183-5749773,5750628-5751160,5751191-5753035,575...    28   9.6  

>03_05_0821 - 27960414-27961253
          Length = 279

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -1

Query: 484 VIYLTKLTSLTDNV*VLLDKLGANLMYVYLHIIVHFIIFVMLVT 353
           V YL+K+  L D + +LL +    L++VY H  V  + ++ L T
Sbjct: 124 VFYLSKVYELGDTLLILLGRRPLTLLHVYHHAAVIAMCYLWLAT 167


>12_01_0089 -
           707260-707317,707626-708050,708663-709621,710223-710408,
           710502-710604,710701-710883,710932-711012,711072-711164,
           711650-711832,713751-713966
          Length = 828

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = -1

Query: 592 HLLKQRVFYINSYCTFSELVVNAFI*TLDDYMLELDVIYLTKL 464
           HL K+ +  I ++C +   ++ A    +  Y LE+ V+Y+  L
Sbjct: 200 HLFKRSIMLIKAWCYYESRILGAHHGLISTYALEILVLYIFHL 242


>11_01_0088 -
           662984-663024,663743-663774,664079-664503,665048-666006,
           666661-666846,666942-667044,667141-667323,667514-667606,
           668092-668274,669011-669031
          Length = 741

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = -1

Query: 592 HLLKQRVFYINSYCTFSELVVNAFI*TLDDYMLELDVIYLTKL 464
           HL K+ +  I ++C +   ++ A    +  Y LE+ V+Y+  L
Sbjct: 108 HLFKRSIMLIKAWCYYESRILGAHHGLISTYALEILVLYIFHL 150


>09_02_0409 -
           8656136-8656318,8656469-8656609,8658608-8658756,
           8658830-8658987,8659326-8659409,8659654-8659787,
           8661255-8661389,8662159-8662551
          Length = 458

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -3

Query: 392 HYCALYHFCNVSNDNKKKLRMTSTISV*YFGYSIC 288
           HY  L H C  +N N+K LR    +    F + IC
Sbjct: 188 HYMKLNHTCGKTNLNRKMLRKIVPLEEYLFKFGIC 222


>05_05_0304 -
           23965842-23965849,23965940-23966107,23966303-23966575,
           23966676-23967039,23967762-23968133
          Length = 394

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +3

Query: 306 ILNRYCRRHSQFFFVVVTNITKMIKCTIMCRYTYIK-LAPNL 428
           IL +Y ++H +  + +V   T +++C   CR  ++  L PNL
Sbjct: 53  ILEKYIKKHGERNWKLVQKNTGLLRCGKSCRLRWMNHLRPNL 94


>03_02_0124 -
           5749183-5749773,5750628-5751160,5751191-5753035,
           5753632-5753820,5753911-5754013,5754087-5754269,
           5754392-5754484,5755031-5755219,5756133-5756327
          Length = 1306

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = -1

Query: 592 HLLKQRVFYINSYCTFSELVVNAFI*TLDDYMLELDVIYL 473
           HL K+ +  I ++C +   ++ A    +  Y LE  V+Y+
Sbjct: 168 HLFKRSIILIKAWCFYESRILGAHHGLISTYALETLVLYI 207


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,945,277
Number of Sequences: 37544
Number of extensions: 238818
Number of successful extensions: 343
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 343
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)