Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P14_pT_A15
(422 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC343.20 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 31 0.074
SPCC4B3.11c |||conserved eukaryotic protein|Schizosaccharomyces ... 29 0.30
SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|c... 27 0.91
SPAC23C4.16c |atg15||triacylglycerol lipase Atg15 |Schizosacchar... 26 2.1
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 25 3.7
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 25 6.4
SPCC1450.14c |ero12||ER oxidoreductin Ero1b|Schizosaccharomyces ... 25 6.4
SPCC16C4.03 |pin1||peptidyl-prolyl cis-trans isomerase Pin1|Schi... 25 6.4
SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyce... 25 6.4
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 24 8.5
SPAC29A4.03c |||mitochondrial ribosomal protein subunit S9|Schiz... 24 8.5
>SPAC343.20 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 113
Score = 31.1 bits (67), Expect = 0.074
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 182 TSLTRFLSGMALYSAFSCHRSLLLKLVPTIRSLHCITQTKDKNMKIKTG 328
T+ T+F S Y A + H SLL KL+ L+ + K K ++I G
Sbjct: 58 TNFTKF-SKFVYYLAITLHTSLLTKLIYCHADLYALQSIKYKRLRINNG 105
>SPCC4B3.11c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 116
Score = 29.1 bits (62), Expect = 0.30
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -3
Query: 180 FFSDPGQQLIMGIIARDLDHSDAEASITAGGIGFSYANIKLKSPRGSGLN 31
F+S PG++ I I+ L S +GG G Y + +KS G N
Sbjct: 27 FYSTPGERRIKDILTEKLSPSSLRVIDVSGGCGSMY-QVAIKSKAFQGKN 75
>SPAP8A3.12c |||tripeptidylpeptidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1274
Score = 27.5 bits (58), Expect = 0.91
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 55 FQLYVGIRKPDASCSNTCFSIRVV 126
F++ V + KP +S SNTCFS+R V
Sbjct: 689 FEIPVTVMKP-SSISNTCFSLRDV 711
>SPAC23C4.16c |atg15||triacylglycerol lipase Atg15
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 424
Score = 26.2 bits (55), Expect = 2.1
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +1
Query: 37 SRASWAFQLYVGIRKPDASCSNTCFSIRV 123
+R SWA+ G K +CS TC V
Sbjct: 223 ARVSWAWSTVCGCYKNTYTCSQTCLEDEV 251
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 25.4 bits (53), Expect = 3.7
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = -3
Query: 279 KDLIVGTSFNKRLLWQEKAEYNAIPLKKRVKEV 181
K+LIV TS ++ L +E+ +NAI KR++E+
Sbjct: 711 KELIVQTSSFQKELVEERERHNAI--SKRLQEI 741
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 24.6 bits (51), Expect = 6.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 164 PGSEKNTSLTRFLSGMALYSAFSCHRSL 247
PG T++ S +SA SCHR+L
Sbjct: 453 PGKTVATTVCHSSSSSGDFSALSCHRNL 480
>SPCC1450.14c |ero12||ER oxidoreductin Ero1b|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 571
Score = 24.6 bits (51), Expect = 6.4
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 154 QLLSRIRKKYFFDSFLEWDGVIFGF 228
Q S I +FD EWD V+ GF
Sbjct: 499 QKTSSILVDLYFDFKAEWDNVMLGF 523
>SPCC16C4.03 |pin1||peptidyl-prolyl cis-trans isomerase
Pin1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 175
Score = 24.6 bits (51), Expect = 6.4
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -1
Query: 236 GKKKPNITPSHSRNESKKYFFRIRDNN*LWVL*PAT*TTRMLKQVLLQEASGFLMPT 66
G KP I SR+ ++ YFF + LW PA LK+ + E + PT
Sbjct: 5 GLPKPWIVKI-SRSRNRPYFFNTETHESLWEP-PAATDMAALKKFIANELQESVTPT 59
>SPAC3G6.11 |||ATP-dependent DNA helicase Chl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 24.6 bits (51), Expect = 6.4
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = -3
Query: 234 QEKAEYNAIPLKKRVKEVFFSDPGQQLIMGIIARDLDHSDAEASITAGGIGFSYANIKLK 55
+EKA+ I K+ +E F+ + + + I R + H D ASI ++ ++I+ K
Sbjct: 753 EEKAKEKGINAKQASQE-FYENTCMRAVNQSIGRAIRHRDDYASIILLDSRYNRSSIQRK 811
Query: 54 SP 49
P
Sbjct: 812 LP 813
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1919
Score = 24.2 bits (50), Expect = 8.5
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -2
Query: 340 NEVRSRFDFHIFIFSLCY 287
N +R+ F+ F+FS+C+
Sbjct: 1495 NYASNRYSFNFFLFSVCF 1512
>SPAC29A4.03c |||mitochondrial ribosomal protein subunit
S9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 132
Score = 24.2 bits (50), Expect = 8.5
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Frame = +2
Query: 128 RSRAIIPIISCCPGSEKNTSLTRFLSGM-----ALYSAFSCHRSLLLK---LVPTIRSLH 283
R A+ P+ +C + N T G A+++A S +SL+L+ L I+ H
Sbjct: 47 RKHAVYPLAACNRLTNYNVWATVHGGGPTGQSGAVHAAIS--KSLILQEPSLKQVIKDTH 104
Query: 284 CITQTKDKNMKIKTG 328
C+ K K + KTG
Sbjct: 105 CVLNDKRKVERKKTG 119
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,669,773
Number of Sequences: 5004
Number of extensions: 32920
Number of successful extensions: 85
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 85
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 150383836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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