Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_A11
         (742 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49129-1|CAA88962.1|  262|Caenorhabditis elegans Hypothetical pr...    32   0.49 
Z73102-5|CAA97410.1|  126|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr...    29   3.5  
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch...    29   3.5  
AL117204-9|CAB55124.1|  358|Caenorhabditis elegans Hypothetical ...    29   3.5  
AF292051-1|AAG41147.1|  126|Caenorhabditis elegans 4M79 protein.       29   3.5  

>Z49129-1|CAA88962.1|  262|Caenorhabditis elegans Hypothetical
           protein T05B9.1 protein.
          Length = 262

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 20/39 (51%), Positives = 23/39 (58%)
 Frame = -1

Query: 697 EITLKNLEEAKAXKIHEIHDLEEKCEELKSQMSDLKAHL 581
           E+T   L +AK+ K      LEE  EELKSQ  DLKA L
Sbjct: 44  ELTQDKLNDAKSRK-----KLEESMEELKSQNLDLKAQL 77


>Z73102-5|CAA97410.1|  126|Caenorhabditis elegans Hypothetical
           protein B0035.4 protein.
          Length = 126

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = -1

Query: 739 IPYLIGEIFICQNLEITLKNLEEAKAXKIHEIHDLEEKCEELKSQMSDLKAHLYGKFG 566
           IP  IG  F+  N +   ++LE  K      + +   + + + + M  +K  LY KFG
Sbjct: 60  IPCRIGSCFVHFNGDSLNEHLEGKKTTAEKVLSEKTSELDAISADMEQIKKVLYAKFG 117


>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
            T18D3.4 protein.
          Length = 1947

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/39 (28%), Positives = 24/39 (61%)
 Frame = -1

Query: 709  CQNLEITLKNLEEAKAXKIHEIHDLEEKCEELKSQMSDL 593
            CQ+++++L+ +E  K  K H+I  L+++  +    +S L
Sbjct: 970  CQDVDLSLRKVEAEKNAKEHQIRALQDEMRQQDENISKL 1008


>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
            T18D3.4 protein.
          Length = 1947

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/39 (28%), Positives = 24/39 (61%)
 Frame = -1

Query: 709  CQNLEITLKNLEEAKAXKIHEIHDLEEKCEELKSQMSDL 593
            CQ+++++L+ +E  K  K H+I  L+++  +    +S L
Sbjct: 970  CQDVDLSLRKVEAEKNAKEHQIRALQDEMRQQDENISKL 1008


>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
            protein.
          Length = 1947

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/39 (28%), Positives = 24/39 (61%)
 Frame = -1

Query: 709  CQNLEITLKNLEEAKAXKIHEIHDLEEKCEELKSQMSDL 593
            CQ+++++L+ +E  K  K H+I  L+++  +    +S L
Sbjct: 970  CQDVDLSLRKVEAEKNAKEHQIRALQDEMRQQDENISKL 1008


>AL117204-9|CAB55124.1|  358|Caenorhabditis elegans Hypothetical
           protein Y116A8C.18 protein.
          Length = 358

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 14/45 (31%), Positives = 28/45 (62%)
 Frame = -1

Query: 706 QNLEITLKNLEEAKAXKIHEIHDLEEKCEELKSQMSDLKAHLYGK 572
           ++L  T+K+LE  K  + H+   + ++ EELK ++ +L+A  Y +
Sbjct: 100 KHLLTTMKSLETEKMEQEHKTKIMNKEVEELKIRVKELEATDYSE 144


>AF292051-1|AAG41147.1|  126|Caenorhabditis elegans 4M79 protein.
          Length = 126

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 16/58 (27%), Positives = 27/58 (46%)
 Frame = -1

Query: 739 IPYLIGEIFICQNLEITLKNLEEAKAXKIHEIHDLEEKCEELKSQMSDLKAHLYGKFG 566
           IP  IG  F+  N +   ++LE  K      + +   + + + + M  +K  LY KFG
Sbjct: 60  IPCRIGSCFVHFNGDSLNEHLEGKKTTAEKVLSEKTSELDAISADMEQIKKVLYAKFG 117


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,434,215
Number of Sequences: 27780
Number of extensions: 230652
Number of successful extensions: 544
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 544
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)