Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P14_pT_A08
         (747 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119144-1|AAM51004.1|  511|Drosophila melanogaster RE48727p pro...    30   2.9  
AE014297-3209|AAF56041.3|  872|Drosophila melanogaster CG4917-PB...    30   2.9  
AE014297-3208|AAN13917.2|  853|Drosophila melanogaster CG4917-PA...    30   2.9  

>AY119144-1|AAM51004.1|  511|Drosophila melanogaster RE48727p
           protein.
          Length = 511

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -2

Query: 608 VKSFLEYDSGNLFLFCLICRITQDFFIAVNLVFNGYRRPWSS*REYTLLHEIDVS 444
           V +F  +  GN   FCL CR     FI V L+    R  W     + + H + +S
Sbjct: 90  VPTFSSFVIGNGIEFCLNCRTALYLFIPVLLIMMAKRSRWHGVYTFLIPHCVTLS 144


>AE014297-3209|AAF56041.3|  872|Drosophila melanogaster CG4917-PB,
           isoform B protein.
          Length = 872

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -2

Query: 608 VKSFLEYDSGNLFLFCLICRITQDFFIAVNLVFNGYRRPWSS*REYTLLHEIDVS 444
           V +F  +  GN   FCL CR     FI V L+    R  W     + + H + +S
Sbjct: 451 VPTFSSFVIGNGIEFCLNCRTALYLFIPVLLIMMAKRSRWHGVYTFLIPHCVTLS 505


>AE014297-3208|AAN13917.2|  853|Drosophila melanogaster CG4917-PA,
           isoform A protein.
          Length = 853

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -2

Query: 608 VKSFLEYDSGNLFLFCLICRITQDFFIAVNLVFNGYRRPWSS*REYTLLHEIDVS 444
           V +F  +  GN   FCL CR     FI V L+    R  W     + + H + +S
Sbjct: 432 VPTFSSFVIGNGIEFCLNCRTALYLFIPVLLIMMAKRSRWHGVYTFLIPHCVTLS 486


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,464,070
Number of Sequences: 53049
Number of extensions: 519692
Number of successful extensions: 1020
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1020
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)